Gene Information

Name : kdsB (IALB_2043)
Accession : YP_005847016.1
Strain : Ignavibacterium album JCM 16511
Genome accession: NC_017464
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2337693 - 2338481 bp
Length : 789 bp
Strand : -
Note : -

DNA sequence :
ATGATAGTCTCCGATAAAAAATCTCCATACATTCTTGGAGTTATTCCAGCAAGATTTGCATCTACTAGACTAATGGGAAA
ACCACTTGCTAACATTGGTGGAAAACCTATGATTCAGCATACTTATGGAAGTGCATTAAAATCAAAGTTGCTGAATAAAA
TCATAATTGCAGTTGATGATGATAAAGTTGCTGATGTCTGTAAATCATTTGGGGCAGCAGTTATGATGACGCCACGCGAT
GTTCAAACTGGCTCAGATAGAATTGCGATTGTTGCAAAGGAATTTCCGAGAGCTGATATCATTGTTAACATTCAGGGCGA
TGAACCTTTTATTAAAGGAATTATGATTGACCAGGCAATTGAACCATTACTGTTTGATGAAAGCATAAATGTTTCAACTC
TTGCAAAAAAAATTATCTCAGTTGACGAGCTTACTTCACCATCAATACCGAAAGTTGTATTCGATTACGAAAATTTTGCT
TTGTATTTCTCTCGCTCAACAATTCCTTATGTAAGAGATGCAAAAGATGAATCAGAAGTACTTGAGATGGCAGACATTTA
CAAACACATTGGATTATATGCATTCAGAAGAGAATCACTTTTCAGATTTACTTCTTTAGAACAAACAGATCTTGAACGCT
GGGAAAAACTTGAACAACTTAGAATGCTTGAACATGGATTTAAAATAAAAGTTGTGGTAACAGAGTTTGATACATTTTCG
GTTGACACACCGGATGATCTGAAAATAGCAAGACGGTTATATTCAAAACTCAAAAAGAAAAAACTTTAA

Protein sequence :
MIVSDKKSPYILGVIPARFASTRLMGKPLANIGGKPMIQHTYGSALKSKLLNKIIIAVDDDKVADVCKSFGAAVMMTPRD
VQTGSDRIAIVAKEFPRADIIVNIQGDEPFIKGIMIDQAIEPLLFDESINVSTLAKKIISVDELTSPSIPKVVFDYENFA
LYFSRSTIPYVRDAKDESEVLEMADIYKHIGLYAFRRESLFRFTSLEQTDLERWEKLEQLRMLEHGFKIKVVVTEFDTFS
VDTPDDLKIARRLYSKLKKKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 5e-31 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 4e-31 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 4e-31 41