Gene Information

Name : IALB_1309 (IALB_1309)
Accession : YP_005846287.1
Strain : Ignavibacterium album JCM 16511
Genome accession: NC_017464
Putative virulence/resistance : Virulence
Product : NtrC family response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1508502 - 1509857 bp
Length : 1356 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATTTAAAATATTAGTAGTTGATGATGAAGAAATTATCCGTGATTCTATCTCATACATTTTGGAAACTGAAGGATA
TGAAGTTGAAAAAGCCGAGAACGGAAAGATTGCTCATGACAAAATCAAAGAGAAACATTTTGATCTTGTCATAACAGACA
TCGAAATGCCAGCGATGAAAGGCACTGAACTACTTGAAAAAATAAAAACTCTTGATCCGCAGACTGCTGTAATCATCATA
ACTGCATTTGGCTCGCTCGATACCGCAATAACAGCTTTGAGGAATGGTGCAAGCGATTACATCCTGAAACCTGTTGAATT
TGATGAACTTCTTATAAAAGTTAAAAGATTATTTGAAGTAAAAGATTTGCTTATTGAAAATAAAGTTTTGCGCGAAGAGA
TTAATCGTAAATATGATTTCGATAATATAGTTGGTAAAAGTCCGGCAATCAAAAAAGTTTTTGATATGATTCAGGCAGTT
GCAGAAACTGATTCAACCGTATTGATTAGTGGAAACAGCGGAACGGGAAAAGAACTTGTTGCAAGAGCAATTCATTACAG
AAGTAAAAGAAAGAATAAACCATTTATAGCAGTCAACTGCGGTGCAATTTCCGAAAATCTGATTGAGAGTGAATTATTCG
GACATAAAAAAGGTGCTTTCACAGGTGCAATTTCAGATAAAGAAGGATTTATTAAAGCTGCTGATGGTGGAACATTATTC
CTTGATGAGATAAGTGAAATGCCTCCTCAGCTTCAGGTTAAACTGCTGCGCGCAATTCAGGAAAAGGAATACACTCCGGT
TGGAACAACTCAATCATTACCAGTCAATGTAAGATTTGTTGCGACAACAAACCGCAATCTTGAAGAAGAAGTTAAAGCCG
GAAGGTTCCGTGAAGATTTATACTACCGACTAAATGTAGTTGAGATTCATCTTCCTTCTTTAAAAGAGAGAGAAGAAGAT
ATTCCACTCCTTGCTGATCATTTCCTTAACAAGTACCGAAAAGAACTCAACAAGAATATCAAAGGAATAGACAACGATGC
GATGAGAGCATTGCTTGCTCACGAATGGAAAGGTGAAGTTCGTGAGTTGGAAAACGTAATTGAAAGAGCTGTAATCTTCT
GCAAAGGTGATTATATATCTGTTGATGATTTACCTCCTTCATTTGTTCCGGATCGTGGAAATCTTGAATTAAGCTTCTCA
GATTCACTTGAAGATAGCGTCAGAAAGTTCGAGAGAGATTTTATAATGAGAGTTCTCGAATCAAATAATTTTAATAAAGA
AAAAACAGCTGATGTTCTTAAAGTTGGTTTATCAACTCTTTACAGAAAACTAAAAGAGCTTGATATAAAGATTTGA

Protein sequence : 
MAFKILVVDDEEIIRDSISYILETEGYEVEKAENGKIAHDKIKEKHFDLVITDIEMPAMKGTELLEKIKTLDPQTAVIII
TAFGSLDTAITALRNGASDYILKPVEFDELLIKVKRLFEVKDLLIENKVLREEINRKYDFDNIVGKSPAIKKVFDMIQAV
AETDSTVLISGNSGTGKELVARAIHYRSKRKNKPFIAVNCGAISENLIESELFGHKKGAFTGAISDKEGFIKAADGGTLF
LDEISEMPPQLQVKLLRAIQEKEYTPVGTTQSLPVNVRFVATTNRNLEEEVKAGRFREDLYYRLNVVEIHLPSLKEREED
IPLLADHFLNKYRKELNKNIKGIDNDAMRALLAHEWKGEVRELENVIERAVIFCKGDYISVDDLPPSFVPDRGNLELSFS
DSLEDSVRKFERDFIMRVLESNNFNKEKTADVLKVGLSTLYRKLKELDIKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 3e-65 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 3e-65 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
IALB_1309 YP_005846287.1 NtrC family response regulator BAC0089 Protein 1e-88 50
IALB_1309 YP_005846287.1 NtrC family response regulator BAC0467 Protein 5e-90 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
IALB_1309 YP_005846287.1 NtrC family response regulator VFG1214 Protein 1e-75 44
IALB_1309 YP_005846287.1 NtrC family response regulator VFG1249 Protein 3e-72 44
IALB_1309 YP_005846287.1 NtrC family response regulator VFG0116 Protein 7e-76 41