Gene Information

Name : ykoD (Cp267_0789)
Accession : YP_005843616.1
Strain : Corynebacterium pseudotuberculosis 267
Genome accession: NC_017462
Putative virulence/resistance : Unknown
Product : HMP/thiamine import ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 800018 - 801418 bp
Length : 1401 bp
Strand : +
Note : -

DNA sequence :
ATGGCCCCTCAAATTTATGCACGAGATTTTGGGTATCGTCACTCCAGCCGCCTCAAGCATGCTTTGCAAGGTCTTAACTT
TGAGGTAGAGCGGGGGGAACGCATCCTCTTACTCGGAGCATCGGGTGCAGGAAAATCTACGCTACTTTCAGCTCTGGCAG
GTGTGTTAGGCGCTGATGAAGGGGAGGGGGAAGGAACTCTTAAGGTTCATGCGACACCTGGGATGGTGTTGCAGGACCCG
GATTCCCAGGTCATTTCCTCGCGGGTGGGGGACGACGTGGCATTTGGCTGCGAAAACCTCCGCCTTCCTAAGGACGAAAT
ATGGCGTCGTGTGCCTATAGCATTGGACCACGTTGGTTTGCGGCTGCCTTTAGACCATCCCACTGCATTGCTGTCGGGGG
GACAAAAACAGCGGCTCGCGCTGGCAGGAGTACTTGCTATGGGCGCTGATTTGCTGCTTCTCGACGAGCCCACCGCCAAC
CTCGACCCTCAGGGAGTCCGCGACGTAGTGGCAGCGGTGGAAACTGCTGCAGATGCCACCAATGCCACAGTAATAATTAT
TGAGCACCGCGTGGATACCTGGCTTGAATTTGTTGACCGTATCATCGTGCTGGGCGATGAAGGAAGCATTATCGCTGATG
CCCCAGCTGATACAGTGATTTCTCAGTACGGGGAGGAACTGGCGCGAGGGGGCGTATGGGTGCCTGGTCACGATCCTCTC
CTGCCCTTGGCACAACCAGTAAGCTCATCTGCGGAGAATGCACTGACAACTCATTCTTTAGCCACGGGATGGGATTCTCC
TGTACAAAGCTCGTTGGATCTTGCCCTCCCTAGGGGCTTTTCGACTGTATTAACCGGAGTTAACGGAGCTGGAAAAACAA
CAACTTTACTCACGCTTGCTGGGTTACTTCCGCCCCTAGGAGGGGAAGTCCGGGTGAATCGTGAGATCGCCGGAAAACTC
AGCCCTCACCCCTATAAATGGTCCTCGACGTCGCTTGCTGCACGCATGGGATATGTTTTTCAAGATCCCGAGCACCAGTT
TGTGGCTAAAACGGTGAGGGAGGAACTTCTTGTTGGCGCAGGAAGTGGACAAACGCCTAAGCCCGAAGCACATCGCCGCG
CAGACGCTCTCCTAGCGAAGCTTCGCCTGGATCACTTGGCAGAAGCAAATCCTTTTACGCTGTCAGGAGGACAAAAACGC
CGGCTTTCTGTGGCCACTATTTTGGTGAATACACCTAGCGTGGTGTTTTTGGATGAGCCGACTTTTGGTCAAGATCGTCG
CACTTTTACCGAGCTTGTGCTGCTATTGCGTCAGCTCACGGACGCTGGGACCACAGTGGTTTCCATTACCCACGATCCGT
TGTATCGCGCGGCGCTAGGAGACAAGGAGATTCAGCTATGA

Protein sequence :
MAPQIYARDFGYRHSSRLKHALQGLNFEVERGERILLLGASGAGKSTLLSALAGVLGADEGEGEGTLKVHATPGMVLQDP
DSQVISSRVGDDVAFGCENLRLPKDEIWRRVPIALDHVGLRLPLDHPTALLSGGQKQRLALAGVLAMGADLLLLDEPTAN
LDPQGVRDVVAAVETAADATNATVIIIEHRVDTWLEFVDRIIVLGDEGSIIADAPADTVISQYGEELARGGVWVPGHDPL
LPLAQPVSSSAENALTTHSLATGWDSPVQSSLDLALPRGFSTVLTGVNGAGKTTTLLTLAGLLPPLGGEVRVNREIAGKL
SPHPYKWSSTSLAARMGYVFQDPEHQFVAKTVREELLVGAGSGQTPKPEAHRRADALLAKLRLDHLAEANPFTLSGGQKR
RLSVATILVNTPSVVFLDEPTFGQDRRTFTELVLLLRQLTDAGTTVVSITHDPLYRAALGDKEIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0906 YP_005159998.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-107 65