Gene Information

Name : HMPREF9231_0978 (HMPREF9231_0978)
Accession : YP_005838306.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Unknown
Product : cobalt transport protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1177258 - 1178151 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
GTGAATAAAACTAGTAGTGCAGAAGAATCGTCTAGTATTAAAGTTAAAGACTTTGAAAGTTTATTAAAAGTTTCGCATAT
TGATGTAACAGCGTCTTCTAAACGTTTAGAAAGTGAACGACTAGTTTCGCCTTCTTGGTTTATTCGTAAGCTTAATCCAA
TAAGTCGTTTTATTGGAGCGTTATTACTTTGCTTGCCTATGTTCGTTACATTAGATATTGTTTCTGCTTCTATTGCATTT
GGTTTAGATATACTGTTATTTGCAATTGCTGGAGTAACTCCTTGGTATGTTTTACGCCATACTTGGCCAGTTTGGATTGC
TGCTTCGGGTAGCTTTATATCTGTGCTTTTATATGGCCAAAGTTCTGGAGATGATATATTTAAGTTTGGCTGGATGCATA
TAAGCCAAGGATCATTGTATTTGGCAATTTGTACGTTTGTTCGTGTTGCATCTGTAGCAGTTCCAGGCGTTATATTAGCT
ATTGGATTAGATCCAACTGATTTAGCAGATGGATTAGTGCAGATTTTGCATTTTTCTCCACGATTTGTGTACGGAGCATT
AGCTGGATTGAGAATGTTTAGTCTATTGCAAAATGATTGGCGTGCTTTTGGTTTAGCTCGCAGGTCTCGTGGTATATCGG
ATGGTAAAGCGTTACAGCGCATGCTTTCGCAATCTTTTGGTTTGCTCGTGTTATCTATTCGCAGAGGTACGAAACTTGCT
ACAGCTATGGAAGCTAGGGCTTTTGGCAGTAGTATTAAACGCGCTCCAGCACGAAAATCGAAGTTAACAGCATACGATTG
GATATTTTATGTAATTTGCATTGCTGTTCCTGCTATTGCTTTATATGCTTCAATACAAACAGGATATTGGCATAATGCGT
TTATTCATATGTAA

Protein sequence :
MNKTSSAEESSSIKVKDFESLLKVSHIDVTASSKRLESERLVSPSWFIRKLNPISRFIGALLLCLPMFVTLDIVSASIAF
GLDILLFAIAGVTPWYVLRHTWPVWIAASGSFISVLLYGQSSGDDIFKFGWMHISQGSLYLAICTFVRVASVAVPGVILA
IGLDPTDLADGLVQILHFSPRFVYGALAGLRMFSLLQNDWRAFGLARRSRGISDGKALQRMLSQSFGLLVLSIRRGTKLA
TAMEARAFGSSIKRAPARKSKLTAYDWIFYVICIAVPAIALYASIQTGYWHNAFIHM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0907 YP_005159999.1 ABC transporter permease Not tested Not named Protein 1e-38 44