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Name : thiC (HMPREF9231_0926) Accession : YP_005838256.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 1104002 - 1106620 bp Length : 2619 bp Strand : + Note : - DNA sequence : ATGCGTGACCAGTTCAACCTAAACACATGTTTTATTGCAAATCCTAAACTATGCAAAAGTCGCGCACTCACGGATATAGT TGACGACTCTTTACGCGCAGGATCAACATTTATAAGGCTTAATTGTGCGGATGAAAGCGCAAAAGAAATCACATCAATCG CACGAGATATTGCACAAATCATAGAAGATAACGATAAATGTGATTCAGTAACTTTCGTAATAGACGGAAGAGTTGACGTT GTCTGGCAAGCAAGAAATCAAGGAATTAAAGTCGATGGAGTTCATCTTGCACAAAGCGACATGGAACCAAAAGAAGCACG AGCACTTTTAGGAGAAGACACAATAATCGGCTTATCTGTTGAAACAGAAAGTCTTGTTAAGATTATTAATGAACTTCCTG ATGGCTGCATTGATTATATTTGTGTAACAGCAATGCATAATCCAGAAGATGGTTGCGAAAACACTACTCCAACTTACGAA TTAGAACCAAATCACACTATTTTAGATGAAGCAAAGATTAATACTATTTGCTCAGCAAGCAATTTTCCAGTACTTGTTGG AGGAAGAACATCTTTAGAAGATGTTGAAATGATTGCTCGCAGTAAGGCTGCAGGATTGTTTGTATCTGAAGCATTGTACG CAAGCGAAACACCAGAATCCACAATGAGTGAATTCGTGGAACGCTTTACGCAAATTCGCGGCAATCAAAAGCACGGTTAT GCAAAACGCGTTATAATTCAGGAAAAAGCTGATGATAAAGCTAACAATACGCCAAAGTTCATTAATGCTAAAGAAGCAAA AGATGCTGCAAAATTAGCAAAGCAACAGCGCGTTGATATTGCTTCTCGCGGATGTACTCAGAGGGACAAAGCTCATATTC GTAAAACTACGCCAGTTCACTTTGAATATGAATATGGTTCTTACGATTTGGAAGTTCCTTATACAGAAATTAAGCTTTCT GATACTCCAGGCGTTGGTCCTAACCCACCATTTAAGGATTACAACACAGAAGGTCCTAAGTGCGATCCTAAGGAAGGCTT GGCTCCACTTCGTCTTGATTGGATTAGAGATCGTGGCGATATTGTTGAATATGAAGGTCGTAGTCGAAATCTTCAAGATG ACGGCAAGCGAGCTATTAAGCGCGGTAAAGCTTCAAAAGAGTGGCGTGGTCGCACTCATAAGCCAATGAAGGCTGCAGAT CATCCTATTACCCAAATGTGGTACGCGCGTCATGGAATTATCACTCCAGAAATGCAGTATGTTGCTACTCGCGAAAATTG CGATGTGGAACTTGTTCGCTCTGAAGTTGCATCTGGTCGCGCTGTGATTCCTTGCAATATCAACCACCCTGAAGCAGAAC CTATGATTATTGGTTCTCGCTTCTTAACTAAGCTCAATGCCAACATGGGTAATTCTGCTGTAACATCTTCTATTGACGAA GAAGTAGAAAAACTTACGTGGGCTACTAAGTGGGGTGCAGATACCGTTATGGATCTTTCCACAGGTAACGATATTCACAC AACTCGCGAGTGGATTTTGCGTAACTCCCCTGTTCCGATTGGTACCGTGCCAATGTATCAAGCTTTGGAAAAAGTTGAGG ATGATGCTTCTAAGCTCAGCTGGGAGCTTTTCCGCGACACTGTTATTGAACAGTGCGAGCAAGGCGTTGACTACATGACT ATTCACGCAGGCGTACTTCTTCGCTACGTGCCTCTTACTGCAAACCGCGTAACTGGTATTGTTTCTCGAGGCGGATCCAT TATGGCTGAATGGTGCTTGCAACACCATCAAGAAAGCTTCTTATACACTCACTTCGAAGAATTATGTGAGATTTTCGCCA AGTACGATGTTGCATTCTCTTTGGGAGATGGTTTACGACCAGGAAGCTTGGCTGATGCAAACGATGCTGCTCAGCTTTCT GAGCTTATGACGCTTGGTGAGCTTACTAAGATTGCTTGGCAACACGATGTTCAGGTTATGATTGAAGGCCCAGGACACGT ACCATTTGATACGGTACGCATGAATATTGAAATGGAGAAAGCGATTTGCCAGAATGCTCCATTCTATACTCTTGGTCCTT TAACAACCGATACTGCACCAGGATATGATCACATTACTTCCGCTATCGGCGGCGTTGAAATCGCTCGTTATGGCACAGCA ATGCTTTGCTACGTCACTCCTAAAGAGCATTTAGGACTTCCTAATAAGGATGACGTTAAACAAGGTGTTATTGCTTATAA GATTGCTTGTCACGCTGCGGATCTTGCTAAGCATCATCCGCATGCCATGGATAGAGATAACGCTATAAGCAAGGCTCGTT TCGAGTTTCGCTGGCTGGATCAGTTTAATTTAAGCTACGATCCAGATACCGCTATCGCTTTCCATGACGAAACGCTTCCA GCAGAGCCAGCAAAAATGGCTCACTTCTGTTCCATGTGTGGACCAAAATTCTGCTCAATGGCTATTTCTCAGAATATTCG CAAGCGTTTCGGTGGCGCAGATCAACAAGAACAACTTGTTGAAGAAGCCCGCAGTCAGGCTATTGCCGAGGGTATGAAAG AGATGAGTAAAAAGTTCCAGGAAGCTGGTTCAACGTTGTATCAAAGCGCCAAAGCGTAG Protein sequence : MRDQFNLNTCFIANPKLCKSRALTDIVDDSLRAGSTFIRLNCADESAKEITSIARDIAQIIEDNDKCDSVTFVIDGRVDV VWQARNQGIKVDGVHLAQSDMEPKEARALLGEDTIIGLSVETESLVKIINELPDGCIDYICVTAMHNPEDGCENTTPTYE LEPNHTILDEAKINTICSASNFPVLVGGRTSLEDVEMIARSKAAGLFVSEALYASETPESTMSEFVERFTQIRGNQKHGY AKRVIIQEKADDKANNTPKFINAKEAKDAAKLAKQQRVDIASRGCTQRDKAHIRKTTPVHFEYEYGSYDLEVPYTEIKLS DTPGVGPNPPFKDYNTEGPKCDPKEGLAPLRLDWIRDRGDIVEYEGRSRNLQDDGKRAIKRGKASKEWRGRTHKPMKAAD HPITQMWYARHGIITPEMQYVATRENCDVELVRSEVASGRAVIPCNINHPEAEPMIIGSRFLTKLNANMGNSAVTSSIDE EVEKLTWATKWGADTVMDLSTGNDIHTTREWILRNSPVPIGTVPMYQALEKVEDDASKLSWELFRDTVIEQCEQGVDYMT IHAGVLLRYVPLTANRVTGIVSRGGSIMAEWCLQHHQESFLYTHFEELCEIFAKYDVAFSLGDGLRPGSLADANDAAQLS ELMTLGELTKIAWQHDVQVMIEGPGHVPFDTVRMNIEMEKAICQNAPFYTLGPLTTDTAPGYDHITSAIGGVEIARYGTA MLCYVTPKEHLGLPNKDDVKQGVIAYKIACHAADLAKHHPHAMDRDNAISKARFEFRWLDQFNLSYDPDTAIAFHDETLP AEPAKMAHFCSMCGPKFCSMAISQNIRKRFGGADQQEQLVEEARSQAIAEGMKEMSKKFQEAGSTLYQSAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-155 | 55 |
