Gene Information

Name : HMPREF9231_0923 (HMPREF9231_0923)
Accession : YP_005838254.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1102205 - 1103029 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGATTCAAATTGAGCATCTTTATAAAACTTACTCAAGTGGTAAGCAATCGCACGAAGCACTTAACGATATTAATTTAAC
TATTGAATCAGGCGAAGTATTTGGTATTTTGGGATCTTCTGGAGCTGGAAAATCATCATTAGTCAGATGCATGAACTTGT
TAGAACGTCCAACATCTGGAAGAGTGCTAATAGACGGAAAAGATATTACGGACGCCAAAAATAGAGATTTATCTAAAATA
AGATCGAATATTGGAATGATTTTCCAAAACTTTAGTCTTTTTCAACAGCGAACTGTGTTACAAAATGTGACTTTTCCTTT
GGAACTAAACAACACTCCTAAAGAAAAAAGAGAAGAACGAGCAAAGTATTTACTCGATTTAGTTGGATTAAAAGATTTAG
CAAACCGTTACCCTGTTCAGCTTTCTGGCGGACAACAGCAAAGAGTTGCAATAGCGAGAGCACTTGCTAATAATCCTTCT
ATAATGCTTTGTGACGAAGCAACAAGCGCCTTGGATTCAACAACTACAGCACAAATACTTGACTTGCTTAGAAGAATCAA
CCGAGATCTTAACGTAACACTGGTTATTATTACTCACTCGTTAGCAGTAGCAAGAAATATTTGCGATAGGGTTGCTATGA
TTGACGGCGGAAAAATCGTAGAGATCGGCGACACTTCAACACTTTTCAAAAATCCTCAAAGCAATATTTTAAAAACGCTT
ATTGCAGACGAACATGTTGAAAACCATAGGGGAACTAAATCCAATAATAGTAATTCCGAAAATGAAATAACCACTAATAG
CGCAACAAACAATGGGGTGAAATAA

Protein sequence : 
MIQIEHLYKTYSSGKQSHEALNDINLTIESGEVFGILGSSGAGKSSLVRCMNLLERPTSGRVLIDGKDITDAKNRDLSKI
RSNIGMIFQNFSLFQQRTVLQNVTFPLELNNTPKEKREERAKYLLDLVGLKDLANRYPVQLSGGQQQRVAIARALANNPS
IMLCDEATSALDSTTTAQILDLLRRINRDLNVTLVIITHSLAVARNICDRVAMIDGGKIVEIGDTSTLFKNPQSNILKTL
IADEHVENHRGTKSNNSNSENEITTNSATNNGVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 6e-50 45
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 3e-50 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9231_0923 YP_005838254.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-32 42