Gene Information

Name : HMPREF9231_0785 (HMPREF9231_0785)
Accession : YP_005838127.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Unknown
Product : cadmium resistance transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 939351 - 939977 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence :
TTGAAAGGAGAAATAATGGAAACAATAGTATCCGCTTTATTAGTTTTTGTTTCTACATCCATTGACTACTTAGTTGTTTT
GACTATTTTATTCGCTAGTCAAGGAAAGAAAGGTTTGAAATCAATTTATGTAGGGCAGTATTTAGGTACAGGACTGCTTG
TACTGGCTAGTCTTATTGCCGCTTACTTTTTAAATTTTATTCCACAAGATTGGATTATCGGACTCCTTGGTCTAATTCCG
CTAGGTCTTGGTATAAGAGCAATTTTTTTGGATGAAGATATTGATGAAGAAGATATCGAGGGGAAAATTATCGGAGATGG
ATCAAAAATCTTAGCATTTACAAGTTTAACAGTAGCAATGGGTGGAGATAATTTAGGAATTTATATCCCCTATTTTACAG
GAAAGAGTTTGATTGAGATTAGTATAAGTTTAGTAATATTTGCCTTAGGGATTTTGATTCTATGCAAATTATCTCAAAAT
CTCGCCTCAATTTCTGCTATCGGAGAGACTGTGGAAAAGTACGAAAAAGTAATTGTACCTGTCGTGTTTATTGGACTCGG
TCTTTATATATTGATTGAAAATGGAACTATTAATTATTTCATAGGTCAAGTCCTAAAAGTGGTGTAA

Protein sequence :
MKGEIMETIVSALLVFVSTSIDYLVVLTILFASQGKKGLKSIYVGQYLGTGLLVLASLIAAYFLNFIPQDWIIGLLGLIP
LGLGIRAIFLDEDIDEEDIEGKIIGDGSKILAFTSLTVAMGGDNLGIYIPYFTGKSLIEISISLVIFALGILILCKLSQN
LASISAIGETVEKYEKVIVPVVFIGLGLYILIENGTINYFIGQVLKVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47611.1 DS RF Not tested Type-III SCCmec Protein 5e-22 45
unnamed BAC57486.1 hypothetical protein DSRF Not tested Type-IIIinv SCCmec Protein 5e-22 45