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Name : HMPREF9231_0676 (HMPREF9231_0676) Accession : YP_005838024.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Virulence Product : PTS system sugar-specific permease protein Function : - COG functional category : - COG ID : - EC number : - Position : 806456 - 807841 bp Length : 1386 bp Strand : + Note : - DNA sequence : ATGAACGGTGTTCTGTCTATACTGCTAGATGTTTTTAGACAACCATCTGTAATAGTTGCAATGATTTCTCTAATTGGTCT TGCAGTACAAGGCAAAAAGATTTCCGACATAGTACAAGGCTCTATTCGTACAATGATTGGTTTCTTAGTATTGGCAGCAG GATCTGGAGTGGTCACTGAAGCGCTAAATCCTTTTGGGAGCATGTTCCAATACGCGTTCCATGTTCAAGGCGTAGTACCA AATAATGAAGCTATAATCGGTACAGTTCTTATGAAGTATGGATCAGAAGCAGCATTAATCTTCTTCTTTGGAATGATTGT TAACATTGTTTTATCAATAACATCTAGATTTAAGTTCATTTACTTAACTGGTCACGTTGCATTCTATATGGCAAGTATGC TAGCAGTAATCTTCAATGTCGCAGGTTTTAATACTCTAACCGTTATTATTCTCGGATCATTCGCTCAAGGTTTACTTATT ACGATTTCTCCAGCATTGGTTCAGTCATTTATGCGCACTGCTTCCGGCAAAGATGATGTTGCACTTGGACACCCTACGAG TAGTGGAGTTCTTATTGGAACTTTGATTGCAAAACTTACAGTTTCTAAAAAGCATCCGTCTAAGTCTACGGAAGATATTA AGTTCCCAGCTGCTCTTGGATTCTTAAAAGATACTACTGTTCTCATTGCACTTTCAATGGCAATTATCTACGCTGTTGTA GCACTTTTTGCGGGTCCGCAATATATTGAATCGCATTTATCTAATGGACAAAACTTTATTGTGTTTGTTATTCTTAAGGC TGCAATGTTCTCTGCAGGCGTTTTCATTATTCTTGCAGGCGTACAGGTTGTTTTAGATGAGATTGTTCCAGCATTTAAGG GAATATCCGAAAAACTCGTTAAAAACGCTAAACCAGCATTGGATGCTCCTATGACTTTTGGTTTTGCTCCAAACGCTGTT CTTATTGGATTCTTGGCAAGCTTTGCTGGCGGAATTGTTGGAATGGTTATTATGGCTTTGGCTGGCACAACAGTTGTTAT TCCAGGAATTGTTGCTCACTTTATGGCTGGTGGTGTTACTGGCGTATTTAGCAACGGCCAAGCTGGTAGAAGAGGCTGCG TTATAGGCGGTTTTGTTAATGGTATTGTTATTACATTCTTGCCGTTACTTCTTTTGCCTGTTTTGGGTAACCTTGGTTCT GCAAACTCCACTTATTCAGACGCTGATTTTGGTGTAACTGGAGTTTTTCTTGGTTACACGAATATTGCAGGAGGCAAAAT CGTAAGTATTATTGCAGTTGTAATATCTTATGTTCTTTTCTACGCGTCTTCAATATTGTTGACTCGCAGAGAAAATAGTA AAGTCAAATATGCAATTGAAAACTAA Protein sequence : MNGVLSILLDVFRQPSVIVAMISLIGLAVQGKKISDIVQGSIRTMIGFLVLAAGSGVVTEALNPFGSMFQYAFHVQGVVP NNEAIIGTVLMKYGSEAALIFFFGMIVNIVLSITSRFKFIYLTGHVAFYMASMLAVIFNVAGFNTLTVIILGSFAQGLLI TISPALVQSFMRTASGKDDVALGHPTSSGVLIGTLIAKLTVSKKHPSKSTEDIKFPAALGFLKDTTVLIALSMAIIYAVV ALFAGPQYIESHLSNGQNFIVFVILKAAMFSAGVFIILAGVQVVLDEIVPAFKGISEKLVKNAKPALDAPMTFGFAPNAV LIGFLASFAGGIVGMVIMALAGTTVVIPGIVAHFMAGGVTGVFSNGQAGRRGCVIGGFVNGIVITFLPLLLLPVLGNLGS ANSTYSDADFGVTGVFLGYTNIAGGKIVSIIAVVISYVLFYASSILLTRRENSKVKYAIEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 6e-86 | 48 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 6e-86 | 48 |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 5e-86 | 48 |
