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Name : smpB (HMPREF9231_0642) Accession : YP_005837990.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 762947 - 763435 bp Length : 489 bp Strand : + Note : - DNA sequence : TTGGATAAAAAACCTGGTTCAGATGGTACTTTAACTGTTGCAAGAAATAAAAAAGCAAATCACGACTATGCGATTGAAGA TTGCTATGAAGCAGGTATTGCTCTTACTGGCACAGAGGTTAAGTCTTTGCGCGAAGGACGCGCTTCTTTAGCTGAGGCGT TTGTGAATATTGATAGACGTGGTGAGATTTGGCTAGAAGGCGCAAATATTCCTGAATATTTAAATGGCACGTGGAATAAT CATGCTCCTAAGCGCAAGCGTAAGTTACTTCTTCATGCGATTCAAATTGCTAAACTTTCTAGGCAAATTGAAGCTAAAGG TTACACTATTGTGCCTTTGAGGATTTATTTTAAAGGCAGCTACGCTAAAGTTGAGATTGCTTTGGCGCGAGGCAAAAAAG AGTACGATAAGCGTCAAGCGTTGCGCGAAGAACAAGATAAGCGCGAAGCATTGCGCGCTATGCGATACAAGAATATGCAA TCTAGGTGA Protein sequence : MDKKPGSDGTLTVARNKKANHDYAIEDCYEAGIALTGTEVKSLREGRASLAEAFVNIDRRGEIWLEGANIPEYLNGTWNN HAPKRKRKLLLHAIQIAKLSRQIEAKGYTIVPLRIYFKGSYAKVEIALARGKKEYDKRQALREEQDKREALRAMRYKNMQ SR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-29 | 50 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 7e-31 | 48 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 6e-18 | 41 |
