Gene Information

Name : HMPREF9231_0526 (HMPREF9231_0526)
Accession : YP_005837882.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Virulence
Product : DNA-binding helix-turn-helix protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 624128 - 624331 bp
Length : 204 bp
Strand : -
Note : -

DNA sequence :
GTGAAAAATAGACTTGAACAAATTAGAAAAGAAAAAGGCATAACCCAGGAAGAACTTGCTGACGCACTTGAAGTATCAAG
ACAAACAGTCGGTTCTTTGGAAAATGGGAGATATAACCCGTCAATCATATTGGCATACAAAATTGCTAAGTACTTTGATT
TAACAATCGAAGAAATATTTATTTACGAGGAGGATAAAAAATGA

Protein sequence :
MKNRLEQIRKEKGITQEELADALEVSRQTVGSLENGRYNPSIILAYKIAKYFDLTIEEIFIYEEDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-12 52
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-09 51
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-09 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9231_0526 YP_005837882.1 DNA-binding helix-turn-helix protein VFG2175 Protein 2e-09 51
HMPREF9231_0526 YP_005837882.1 DNA-binding helix-turn-helix protein VFG2168 Protein 2e-09 51