Gene Information

Name : HMPREF9231_0497 (HMPREF9231_0497)
Accession : YP_005837855.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Unknown
Product : phage portal protein, HK97 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 598658 - 599947 bp
Length : 1290 bp
Strand : +
Note : -

DNA sequence :
ATGAGTATTTTCAGTAAAATTTTTAAGAGCAGAGATAAGCCTGAGAATCGTTTTAACTTGAATGCTCAAAGGTTTATTAG
TGGCATGTCTTCTTCTGGTAAGAGGGTGAATGAGCGTTCAGCGATGCAGATGACGGCTGTCTACTCGTGTGTGCGTATCC
TGTCTGAGGCGGTGGCGAGTCTGCCGCTTCACGTGTATGAGCACACGAGTACGGGTACGGCTAAAGCGGTTAAACATCCT
TTGTATAAGGTGCTTCATGATGAGCCGAATCTTGAAATGACAAGCTTCGTGTTTAGAGAAACCTTGATGACGCATCTACT
GTTATGGGGTAATGCTTACGCGCAGATTATTCGAAACGGTAAAGGCGAGGTTTTAGGCTTATACCCTTTAATGCCTGATC
GTATGAGAGTTGACCGGGATGAGAGTGGCCAAATTTTTTACGAGTATACGTTAAATGATAGTGATGTTTTAGCGGGTAAA
GAAACGAGTGTGAAACTTAAACCCTTTGACGTGCTTCATATTCCCGGTCTTGGTTTTGACGGTCTTGTTGGTTATTCGCC
TATTGCGATGGCAAAAAACGCTATCGGTATGGCGATAGCTACGGAAGAGTATGGTGCATCGTTTTTCGCTAACGGTGCTA
CACCAAGCGGCATCTTGGAATACCCCGGAACAGTAAAAGATCCTCAAAGTATGAGGGATAGTTGGAATAAGGGGTTCTCG
GGTTCTAACTCGCATAAGATAGCGATTTTAGAGGAAGGCATGAAGTATACGCCTATTTCTATTTCGCCTAACGAAGCGCA
GTTTCTTGAAACTCGTAAGTTTCAGATTAACGAGATTGCTCGTATTTTTAGAGTCCCACCACACATGGTTGGTGATTTGG
AAAAATCGAGTTTTTCTAATATTGAGCAGCAGTCGTTGGAGTTTGTTAAATACACGCTGGATCCTTGGGTGGCGCGTTTT
GAACAGTCTATTACGAGACGGCTTTTTACTGATAAGGAGAAAGAAACCTATTATGTGAAGTTTAACGTGGATGGTCTTCT
TCGAGGAGACTATCAGAGTCGTATGAATGGTTATGCTACCGCTCGTCAAAACGGTTGGATGAGCGCAAACGATATTAGAC
AGTTAGAAAACTTGGATAAGATTCCCGCCTGTGAGGGTGGTGACTTGTATTTGATTAACGGTAACATGCTCCCGCTTAAC
CGTGCGGGAGCGTTCGCAAACAGTAGTGGAAAGGAGGAAAAAGGTGATGAGGAAGTTTTGGCAGTGGAAAAACCAGGCGG
TCAACAGTGA

Protein sequence :
MSIFSKIFKSRDKPENRFNLNAQRFISGMSSSGKRVNERSAMQMTAVYSCVRILSEAVASLPLHVYEHTSTGTAKAVKHP
LYKVLHDEPNLEMTSFVFRETLMTHLLLWGNAYAQIIRNGKGEVLGLYPLMPDRMRVDRDESGQIFYEYTLNDSDVLAGK
ETSVKLKPFDVLHIPGLGFDGLVGYSPIAMAKNAIGMAIATEEYGASFFANGATPSGILEYPGTVKDPQSMRDSWNKGFS
GSNSHKIAILEEGMKYTPISISPNEAQFLETRKFQINEIARIFRVPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVARF
EQSITRRLFTDKEKETYYVKFNVDGLLRGDYQSRMNGYATARQNGWMSANDIRQLENLDKIPACEGGDLYLINGNMLPLN
RAGAFANSSGKEEKGDEEVLAVEKPGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01026 YP_001437131.1 hypothetical protein Not tested Not named Protein 2e-55 41