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Name : HMPREF9231_0480 (HMPREF9231_0480) Accession : YP_005837838.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase domain protein Function : - COG functional category : - COG ID : - EC number : - Position : 581413 - 583389 bp Length : 1977 bp Strand : + Note : - DNA sequence : TTGGAAAATTTGAGTGTGGATTTAGAAACGTTTTCGAGTGTAAATCTTGGTAAATGTGGTGTTTACAAGTACGCAGAATC GGATGATTTTGAGATACTGCTCTTTGGTTACAGTGTGGACGGTAGTGAAGTTCAGGTCGTTGATTTAGCACAAGGTGAAA CCATACCCGAGGTTGTGCTTTCTGCTTTAACGGATGAAACGGTGACCAAGTGGGCGTTTAACGCTCAGTTTGAAAGAGTC TGCTTATCACGCTACCTGCGAGATAAAGGCATCAATGTTAACCCTGGTCAGACAGGAAAAAGTGAAGGCTTGTTTTTAAA CCCCTGCTCCTGGCATTGCACAATGATCTGGTCAGCCACCCTGGGGCTTCCCATGTCTTTGGAAAGCGTGGGAACAGTAC TGGGTCTTGATAAGCAGAAGCTAACTTCGGGTAAGAGTCTTATTAAATATTTCTGCCTGCCGTGTAATCCTACGAAAGTA AACGGTGGAAGAACAAGAAACAAGTATTTTCACGATAAGGAAAAATGGGAGCAGTTTAAATCGTATAACAAGCGTGATGT GGAAGTTGAGATGAGTATTCAAGAAAAGCTCTCACGCTTTCCCGTGCCAGACTTTTTATGGCAGGAGTTTTATCTCGACC AAGAGATTAACGACCGTGGGATAGGAATAGATTCTCTTTTCGTTGAATCAGCCATAAAACTCGACCAGGAGGTGAAAACT CATCTCGTGGATGAGCTTAAGCATGTTACAGGTTTAGAAAACCCGAACTCCGTGTTACAAATGCGCTCTTGGCTTAAAAA GCATGGTCTTGAAATGGAGTCGCTTGGTAAAAAAGAAGTCGCTAAAGAGCTTAAAACAGTGGGTAAAGAGTTGGCGGAAG TTTTACGTCTTCGCCAGCAGCTTGCTAAATCTTCGGTGAAAAAGTATACGGCGATGAAAAACGCTGCCTGTATGGATTAT CGGGAGCGTGGCATGTTTCGCTTCTATGGTGCAAACCGTACCGGAAGGTTTGCGGGAAGGCTTGTGCAATTACAAAACCT GCCACAAAACCATCTGCCTGATTTGGCGGAGGCTAGAAGTCTTGTTAAACAGGGAAATGTTGAAGCTTTGGAAATGCTTT ATGAGGATATTCCGGATACTTTATCCCAGCTTATTCGCACTGCTTTTATTCCACGCACGGGATTGAAGTTTATTGTCGCA GACTTTTCAGCGATCGAAGCGAGAGTCTTGGCTTGGCTTGCGGGTGAAAAATGGCGTATGCGAGTATTCGCGGAGGGTAA AGACATTTACTGCTCGTCAGCATCTCAAATGTTTAGCGTGCCTGTTGAAAAACACGGAGTAAACGGGCACCTGCGGCAGA AAGGTAAGATCGCGGAACTCGCTCTTGGATATGGCGGCTCTGTTGGTGCGTTAAAAGCTATGGGAGCACTCGACATGGGG GTTCGTGAGGATGAGCTGCAGCCACTTGTTGACGCGTGGAGATCATCTAATCCTATGGTGACCACACTGTGGTGGGATGT GGACAGAGCTGTAAAACAGTGTGTACACGAACGCATTTCTGTTCGAACACACAATATAGTGTTCACTTACAAGAGTGGGT TTCTTATCATCAAACTGCCTTCGAAAAGATGCCTTTACTATGTGAAGCCACGCGTGGAAGAAAACAAGTATGGTGGCGAA TCAGTCACCTATGAGGGTGTGGGGTCTACTAAAAAATGGGAGCGGCTGGAAAGCTACGGGCCTAAATTTGTGGAAAACAT TACGCAAGCTATAGCTCGTGACATTCTACTTTACGCTATGCAAACGCTGAAAGAATATCGTATCGTCGCTCACGTGCATG ATGAAGCCATTATCGAAACCGATAAGAATGTGAGTGTTCAAAGCGTGTGTGAGCTAATGGGAAGAACACCACCCTGGGCG GAAGGGCTTGTTTTACGCGCTGACGGCTACGAGTGCGAGTTTTACAAAAAAGATTAA Protein sequence : MENLSVDLETFSSVNLGKCGVYKYAESDDFEILLFGYSVDGSEVQVVDLAQGETIPEVVLSALTDETVTKWAFNAQFERV CLSRYLRDKGINVNPGQTGKSEGLFLNPCSWHCTMIWSATLGLPMSLESVGTVLGLDKQKLTSGKSLIKYFCLPCNPTKV NGGRTRNKYFHDKEKWEQFKSYNKRDVEVEMSIQEKLSRFPVPDFLWQEFYLDQEINDRGIGIDSLFVESAIKLDQEVKT HLVDELKHVTGLENPNSVLQMRSWLKKHGLEMESLGKKEVAKELKTVGKELAEVLRLRQQLAKSSVKKYTAMKNAACMDY RERGMFRFYGANRTGRFAGRLVQLQNLPQNHLPDLAEARSLVKQGNVEALEMLYEDIPDTLSQLIRTAFIPRTGLKFIVA DFSAIEARVLAWLAGEKWRMRVFAEGKDIYCSSASQMFSVPVEKHGVNGHLRQKGKIAELALGYGGSVGALKAMGALDMG VREDELQPLVDAWRSSNPMVTTLWWDVDRAVKQCVHERISVRTHNIVFTYKSGFLIIKLPSKRCLYYVKPRVEENKYGGE SVTYEGVGSTKKWERLESYGPKFVENITQAIARDILLYAMQTLKEYRIVAHVHDEAIIETDKNVSVQSVCELMGRTPPWA EGLVLRADGYECEFYKKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SEQ_2073 | YP_002747288.1 | phage DNA polymerase | Not tested | ¥ÕSeq4 | Protein | 7e-148 | 50 |
| polA | YP_494120.1 | phage related DNA polymerase family A | Not tested | ¥ÕSa2 | Protein | 9e-140 | 47 |
| MW1425 | NP_646242.1 | DNA polymerase | Not tested | ¥ÕSa2 | Protein | 1e-139 | 47 |
