|
Name : HMPREF9231_0477 (HMPREF9231_0477) Accession : YP_005837835.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 579503 - 580633 bp Length : 1131 bp Strand : + Note : - DNA sequence : GTGACTAAGCATGCTTTACTTTCCCCATCTTCTGCTCACAGGTGGATTAAGTGTACTCCTAGCGCTGTTTTAGAAGAAAA GTTTGAAAACACTACTTCTGCAGCGGCTGAGGAAGGAACGGCGGCACACGCGTGGTGTGAGTACAAGCTGAATAAGCTTC TTAACCGTCCGTGCGAAAAACCGTCCACCGAGTATGACTCAAACGAGATGCAGGAATGCTCGGATGCTTACGTGGATTTC GTAATGGAAAAATACGAGCAGGCAAAACTTAACTGCCAAGATCCTATCCTTCTCATCGAGCAGAAGGTTGATTTTTCAGC TTACGTGCCTGACGGGTTTGGAACAGCGGACTGCATTATTGTAGGCGAAAAAACGCTGCAGATTATCGACTTTAAATACG GTCAAGGCGTGCTAGTGGATGCTTACGAGAATCCTCAGATGAAATGCTACGCTCTTGGAGCTTTAACGCTTTTCGACAGC TTGTACGAGATACAAACTGTTGAGATGAGTATTTTTCAGCCAAGACGTGACAACGTATCCACTTTCACACTACCTGCCAC GGAGCTTATCTCTTGGGCTGAAAAAGTGCTTAAACCAAAAGCAGAGCTTGCTATTAAAGGCGAAGGCGAATTTGAAGCCG GTGACTGGTGCAGGTTTTGCAGGGCAAAAGCCACGTGCCGTAAACGTGCGGAAGAAAACCTTAAACTTGCAGAACTTGAG TTCAAACCGCCATCTGTTTTAACAGATAGTGAGATTGAAGAAGTGCTCACGCTTATTCCGCAGTTAACGAAGTGGGCTGA TGATGTTTTAGCTTACGCCACAGATTCCGCTATTAACCACGGCAAAGAGTGGAGCGGTTTCAAACTCGTAGAAGGCAGAT CAGTTCGCAAGTTTAAGGACGAGACAGCTGTTATTGAGAAAGCAAAAGCTCATGGCTTTACCGACATTTTCAAAACTAGT CTTATCGGTTTAACGGAAATGCAAAAGCTGATGGGCAAGAAAAAATTTGAGGATATTCTGGGCGACCTCATTATAAAACC GTCCGGAAAACTTACGCTCGTACCAGACTCGGATAAGCGGGCAAAAGTTAACGTAACAAATGTAAACCAAGAATTCAAAA AGGAGAATTAG Protein sequence : MTKHALLSPSSAHRWIKCTPSAVLEEKFENTTSAAAEEGTAAHAWCEYKLNKLLNRPCEKPSTEYDSNEMQECSDAYVDF VMEKYEQAKLNCQDPILLIEQKVDFSAYVPDGFGTADCIIVGEKTLQIIDFKYGQGVLVDAYENPQMKCYALGALTLFDS LYEIQTVEMSIFQPRRDNVSTFTLPATELISWAEKVLKPKAELAIKGEGEFEAGDWCRFCRAKATCRKRAEENLKLAELE FKPPSVLTDSEIEEVLTLIPQLTKWADDVLAYATDSAINHGKEWSGFKLVEGRSVRKFKDETAVIEKAKAHGFTDIFKTS LIGLTEMQKLMGKKKFEDILGDLIIKPSGKLTLVPDSDKRAKVNVTNVNQEFKKEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1449 | YP_005681715.1 | Protein p51 | Not tested | PiCp 5 | Protein | 1e-64 | 46 |
| CpC231_1448 | YP_005683812.1 | Protein p51 | Not tested | PiCp 5 | Protein | 8e-65 | 46 |
| CpI19_1455 | YP_005685898.1 | Protein p51 | Not tested | PiCp 5 | Protein | 8e-65 | 46 |
| MW1427 | NP_646244.1 | hypothetical protein | Not tested | ¥ÕSa2 | Protein | 1e-60 | 43 |
| SAUSA300_1425 | YP_494122.1 | hypothetical protein | Not tested | ¥ÕSa2 | Protein | 1e-60 | 43 |
