|
Name : HMPREF9231_0455 (HMPREF9231_0455) Accession : YP_005837814.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Unknown Product : putative oligopeptide ABC transporter, permease protein OppC Function : - COG functional category : - COG ID : - EC number : - Position : 559522 - 560511 bp Length : 990 bp Strand : + Note : - DNA sequence : ATGGAAGATAATTTGATGGAAGATAATTTGATTACAAATAATGCAAATTACAACACATTGCCAGGTCAGGAACGCTATGT TGCTCCTCTTGACGATACGCCTCTTCAAGAAGTTGATTCTGTAGACGAATCTGCTCCAGCTACAAGCATGTGGGCTGATG CTTGGAGATCTTTGCGCAGAAATCCATTGTTTATTGTTTCTGCAATTTTGATTATTGCAATTATTTTTGTTGCGCTCTTC CCAGGCGCTCTCACAAAGCACAATCCTAATTACTGTGTTTTGGAGCATTCGCTTGAGCCAGCTTCTGCTGCACATCCGTT TGGATTCGACATGCAAGGATGCGATATTTACGCTCGAGTTGTATATGGAACACGTACATCTTTAAGCGTTGGCTTGCTCG CAACGGCTTTAGTGGTGTTAGTTGGTTCGCTAATTGGAGCTTTGGCTGGATTCTTTGGCGGATGGATTGATGCGGTTCTT AGCCGAATCACCGATATCTTCCTGGCTCTACCAATGCTGTTGGGTGCAATCGTAGTTTTGCAAATGTTCCGCACATCTAA GTCGATTTGGAAAATCGTGTTTGTTATGGTTCTCTTTGGATGGGTAGGCGTTGCTCGAATCGCAAGAAGTGCCGTTATGG AATCCAAGAATCTTGAGTTTAATACGGCTTCTACAGCTTTAGGTTCAACTCCAATGCGTAATCTTTTCTGTCATATTATT CCAAACTCGCTGGCCCCAATCATTGTTGTAGGAACAACATCCCTTGGTTCTTACATTGTTTTGGAAGCAACACTTAGCTT CCTTGGTATTGGTTTGCCAACTACGACCGTTAGCTGGGGTGTAGATATTTCTACCGCTAGGAATGTTCTTACTACAAATC CAGAAGTTTTGTTCTATCCGTCTATTGCGCTCGCTATTACTGTTCTCGCCTTTATTATGATGGGCGACGCCGTAAAAGAT GCGTTGGATCCAAAGAGCCGTAAGGCGTAA Protein sequence : MEDNLMEDNLITNNANYNTLPGQERYVAPLDDTPLQEVDSVDESAPATSMWADAWRSLRRNPLFIVSAILIIAIIFVALF PGALTKHNPNYCVLEHSLEPASAAHPFGFDMQGCDIYARVVYGTRTSLSVGLLATALVVLVGSLIGALAGFFGGWIDAVL SRITDIFLALPMLLGAIVVLQMFRTSKSIWKIVFVMVLFGWVGVARIARSAVMESKNLEFNTASTALGSTPMRNLFCHII PNSLAPIIVVGTTSLGSYIVLEATLSFLGIGLPTTTVSWGVDISTARNVLTTNPEVLFYPSIALAITVLAFIMMGDAVKD ALDPKSRKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppC | YP_005160016.1 | putative peptide transport system membrane protein | Not tested | Not named | Protein | 6e-74 | 57 |
