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Name : HMPREF9231_0453 (HMPREF9231_0453) Accession : YP_005837812.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Unknown Product : ABC transporter substrate-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 556719 - 558350 bp Length : 1632 bp Strand : + Note : - DNA sequence : ATGAAGAATAAGGCATTACTTTTTGCCGCAGCTGCGTGCTCGGTTGCTATGCTGCTAGGTGGATGCGGTTCTTCTGCCTC GAAGACCGCTCAAACAAATGGTGGCAAGGTTGTTATTACTGTAAACGACTCCGAGCCTCAGAACGAGCTTGTTCCAGGAA ACATTAACGAGAATGCTGGTGCTCGTCCTGCTGTATTGGTCAACTCCACGTTGGTCACTTTTGATGAAAAGGGCAACACG GTAAACGAAGATGCCGAGAGCGTAACTCCAAACGCCGATGCGACCCAATACACTGTTAAGCTTAAAAAAGATAAGAAGTT CAGCGATGGCACTCCAATCACCGCAGAAAGCTTTACTAAGGCTTGGAGCTTTGTAGCAAACGCTAAGAATGCTCAGAAGT GCTCTTCCTTCTTCCAGACCATTAAGGGCTACGAAGACTTGCAGAAGAATGATACTAAGGGCGACGAGCAGCTTTCTGGC TTAAAGGTTGTAGATAAGTACACCTTTACTGTTGATTTGAACCAGCCAGATTCTGTGTTTGCTGTTAAGGTTGGTTACCT TGCATTCGCCCCTCTTCCAGAGTCCTTCTACAAGAATCCAAAGGCTTACGGCGAAAAGCCAGTTTCTTCTGGACCATACT TGTTTAAGTCTTGGGATCACAACAAGCAGATCGAAGTTGTAAAGAACCCAGATTACGATGGCCCACGCAAGGCTCAGAAT GACGGCGTTACCTTTAAGATTTACACCGACGGCACCGCTGCTTACCGCGATGTTCAGTCTGGCAATCTTGATATGACGGA TAATATTCCAGATACCGAAACAAAGACTTTCCAAAAGGACACCACTGTTAAGGCATACAACCGTCCAGGTTCCGTAATCC AGCAGTTCGGTATTCCTGCAAAATTGCCACACTTCGATGTAACTACCGAAGAAGGCCGCTTGCGTCGTCAAGCTGTTTCT ATGGCAATCGATCGCGAAACCATCATCAAGAAGGTTCTTAACAGTACAGCATCTCCTGCAAACGAGTTCACTTCTCCTTT GACTCCAGGCTACAAGGCAGATCTTAAGGGACACGAAAACCTTAAGTTTAATGCCGCAAAGGCTAAGGAACTTTGGGCAA AGGCAGATAAGATCTCTAAGTATGATGGTCCTCTTACCTTTACTTACAACGCCGATGGCAACGCTAAGTCTGTGTTCGAC GCAGTTGTAAACTCCCTTAAGAATCATCTTGGAATTAATGCTGAAACCACTCCAGTTCCAACATTCCAAGAGTTCCGTAA CGCATGCGAACAGCGTCAGATTAAAGGTGCATGGCGTGCAGGCTGGATGCCAGATTACCCAAGCCCAGAAAACTACTTGA CTCAGGAATTTGCTTCCGTTGCTGCAGATGGCAATGGTTCTAACGAAGCTGATTACAAGAATCCTAAGTTCGATGCTTTG CTTAAGAAGGCTTCTTCTTCTAAGCAAGCTGAGGCAACTAAGCTTTATCAGCAAGCTAACGAGATTCTTCTTGAGGATCT TCCATACGTACCACTGTTCTACTCGAACGCTAAGGCTGTTATGATTCCAAGCTTGAAGGGCTTTGTAATGGATTGGCAGA ATATGCCACTTTACTACAAGCTCCACAAGTAA Protein sequence : MKNKALLFAAAACSVAMLLGGCGSSASKTAQTNGGKVVITVNDSEPQNELVPGNINENAGARPAVLVNSTLVTFDEKGNT VNEDAESVTPNADATQYTVKLKKDKKFSDGTPITAESFTKAWSFVANAKNAQKCSSFFQTIKGYEDLQKNDTKGDEQLSG LKVVDKYTFTVDLNQPDSVFAVKVGYLAFAPLPESFYKNPKAYGEKPVSSGPYLFKSWDHNKQIEVVKNPDYDGPRKAQN DGVTFKIYTDGTAAYRDVQSGNLDMTDNIPDTETKTFQKDTTVKAYNRPGSVIQQFGIPAKLPHFDVTTEEGRLRRQAVS MAIDRETIIKKVLNSTASPANEFTSPLTPGYKADLKGHENLKFNAAKAKELWAKADKISKYDGPLTFTYNADGNAKSVFD AVVNSLKNHLGINAETTPVPTFQEFRNACEQRQIKGAWRAGWMPDYPSPENYLTQEFASVAADGNGSNEADYKNPKFDAL LKKASSSKQAEATKLYQQANEILLEDLPYVPLFYSNAKAVMIPSLKGFVMDWQNMPLYYKLHK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0922 | YP_005160014.1 | putative peptide transport system secreted protein | Not tested | Not named | Protein | 2e-103 | 45 |
