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Name : HMPREF9231_0424 (HMPREF9231_0424) Accession : YP_005837784.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Unknown Product : sortase family protein Function : - COG functional category : - COG ID : - EC number : - Position : 523848 - 524978 bp Length : 1131 bp Strand : + Note : - DNA sequence : ATGAAGCTAGCCGATATTAGCAATTGGTGCCACTCGTTGAGCGAGCGCGCGGTTGCTAAATTGTTCAAGAATAAGGCGAA GCGTACCTCCAGTGTGGCTGGCACGAGCAGTGTGGCTGGTGCGAGTGATTTGCTAGAGGAAGAATCGCAAGCAACCGAAG AGCAAACTCCACGATCCAACTCAAGCAAAAATATAAACCAAAATACACTTAAAACTAAAAAAATAACTAAAAAGAAAAGC GCGCTGATGCGCATTCTAGAGCCGATTGCGCTGGTTCTTGCAGGCATTCTGTGCTTTAGCTACCCTGTGTGCTCAACGCT GTGGAATAATCACGTTTCTAAGGAGATTTCCACTGCGTACGATAAGTACAATCACGACCAGGCTGGCGACGTGCGGCGCG CGCACATTCGCGGCGCAAAGCGCTACAACGCAACGCGCAAGGATATGCTCACGCGCGACCCGTACGGCGGCGACGGTCAG GAAGATATAACTAACACGCCTGGATACAAGCGTTATCTTAAAACGCTTGAGGAGCCGATGGGCATTATTGGCATTGTAAA AATTCCGAAGATTGGCGTAAAGCTGCCGATTTACCACGGTACAAAAGAAGATACGCTTGCGCGAGGCGCGGGGCACTTGT ATGGCACGGATTTGCCAGTGGGCGGCAAGGGGCGGCATACTGTGATCACTGCGCACACTGGTTTGCCGAACGCAACCATG TTTGATTCGCTAACAGACCTTAAAAAGGGTGACTACTTTTATCTTGATGTGCAAGGGGAGACCTTGCGTTACAAGGTGTT TCGTATAAACGTGGTGGATCCGCACGATATAAGTTTGCTGCAGCGCGAGAAGGGGCGCGATTTAGCTACGCTGCTTACTT GTACGCCGTATGGTGTGAACTCGCATAGGTTGCTGGTTACGGGGTATCGTGTGCTGCCGGACCCTGTTGCGCCGCCAGAA GACCATGTGCAATGGCCGCTATGGATGACGTTGTTTGTTATTGCGATGATATTCTCGGCGGCGATTCTTGCCATGATGAT CACTGTGGTTGCTGGTAAGAGGCGGCGTAAGTGGGATATTCGCGGCAAGCACATACTGTGGGTTGGGCGCGGCGAGATTA AACTGCGCTAG Protein sequence : MKLADISNWCHSLSERAVAKLFKNKAKRTSSVAGTSSVAGASDLLEEESQATEEQTPRSNSSKNINQNTLKTKKITKKKS ALMRILEPIALVLAGILCFSYPVCSTLWNNHVSKEISTAYDKYNHDQAGDVRRAHIRGAKRYNATRKDMLTRDPYGGDGQ EDITNTPGYKRYLKTLEEPMGIIGIVKIPKIGVKLPIYHGTKEDTLARGAGHLYGTDLPVGGKGRHTVITAHTGLPNATM FDSLTDLKKGDYFYLDVQGETLRYKVFRINVVDPHDISLLQREKGRDLATLLTCTPYGVNSHRLLVTGYRVLPDPVAPPE DHVQWPLWMTLFVIAMIFSAAILAMMITVVAGKRRRKWDIRGKHILWVGRGEIKLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| srtB | YP_005137208.1 | putative fimbrial associated sortase-like protein | Not tested | Not named | Protein | 5e-43 | 42 |
