Gene Information

Name : HMPREF9231_0367 (HMPREF9231_0367)
Accession : YP_005837728.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Virulence
Product : zeta toxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 463149 - 463958 bp
Length : 810 bp
Strand : +
Note : -

DNA sequence : 
ATGGGTAAGTGTGATTTTGCTATGGTTATAGAAGATTTTAGCGAAGAGTATTTTACTCACTGTTTGTTAAGAAATTTACG
TTCTTTACAAATGTATAAGCATGCAGATTTGCATCCTAAGGCGGTTTTACTCGGTGGTCAAAGTGGTGCTGGCAAAACGA
CCATTCATGTAATAAAACAAAAAGAATTTAACGGTAACATAATAATCCTTGATGCTGATAGCTATAGGACTCAACACCCT
TATTATTGCGAGTTGCTTGATAAATACGGTAAAGAAAGTGTTAAATATACGAGTGCTTTTTCAGCAAAAATGGTGAGAAG
CTTAATTGATGAGTTAAGTTCTAAAAAATATAATCTCATAATTGAAGGTACTTTGCGCAGTGTTGAAGTTCCTAGTAGTA
CTGCGAAAATGTTGATAGATCGTGGTTACCGTGTTTCTCTTGCTGTCATTGCAACAAAACCTGAATTGTCATGGATCAGT
ACGCTGATTCGCTACAGGGAAATGTATTTGGAAGATCCTAAAAGTGCTAGGGCAACTCCTAAGGATCATCACGACAATAT
TGTGAACAATATAGTAGATAACTTGTTGAAATTAGAACAATCGAAAATATTTGACAGAATTCAGATTTACAAGCGAGACG
AAAAATGTATATATGATTCTGATTCGTATAAAAATAATCCAAATATTACAGCAGCTAGTGTTCTTAAGGAAGTGCTCTTT
GGTAAGAAAACTATTGATGAGAAAAAGTTGATTTGCCACGCTAAGAATAGGTTGAATGAACTAGACAAGTTGATAGATAA
AAGTTTGTAG

Protein sequence : 
MGKCDFAMVIEDFSEEYFTHCLLRNLRSLQMYKHADLHPKAVLLGGQSGAGKTTIHVIKQKEFNGNIIILDADSYRTQHP
YYCELLDKYGKESVKYTSAFSAKMVRSLIDELSSKKYNLIIEGTLRSVEVPSSTAKMLIDRGYRVSLAVIATKPELSWIS
TLIRYREMYLEDPKSARATPKDHHDNIVNNIVDNLLKLEQSKIFDRIQIYKRDEKCIYDSDSYKNNPNITAASVLKEVLF
GKKTIDEKKLICHAKNRLNELDKLIDKSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1051 NP_345525.1 hypothetical protein Not tested PPI-1 Protein 7e-67 59
SPN23F_09710 YP_002510952.1 zeta-toxin Virulence PPI-1 Protein 9e-66 58
SSU05_0936 YP_001198302.1 Signal recognition particle GTPase Not tested 89K Protein 3e-66 58
SSU98_0943 YP_001200501.1 Signal recognition particle GTPase Not tested 89K Protein 3e-66 58
Spaf_1102 YP_006309904.1 hypothetical protein Not tested FWisland_1 Protein 4e-64 57