|
Name : rplS (HMPREF9231_0319) Accession : YP_005837684.1 Strain : Gardnerella vaginalis HMP9231 Genome accession: NC_017456 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : - COG ID : - EC number : - Position : 377908 - 378276 bp Length : 369 bp Strand : + Note : - DNA sequence : ATGGTGAATGCTGTAGAAGCATTTGATGCTAAGCATCTTAAGTCTGCTGAGGAAATCCCAGCTTTCCGTCCTGGAGATAC TGTTGACGTTAACGTTAAGATTCAGGAAGGCAACAACACTCGTATTCAGACCTTTACTGGCGTTGTTATCGCTCGTAAGG GTGCTGGCGTTCGCGAGACTTTCGTTGTACGTAAGGTGAGCTTCGGCACTGGTGTTGAGCGTCGCTTCCCACTTCATTCC CCAGCTATCGATTCGATTAAGCTGGTTCGTAGTGGTCGCGTTCGTCGCGCTAAGCTTTACTACTTGCGCGCTTTGCGTGG TAAGGCTGCTCGTATTGCCGAGCGTCGTGACAACAGCGCTGCTAAGTAA Protein sequence : MVNAVEAFDAKHLKSAEEIPAFRPGDTVDVNVKIQEGNNTRIQTFTGVVIARKGAGVRETFVVRKVSFGTGVERRFPLHS PAIDSIKLVRSGRVRRAKLYYLRALRGKAARIAERRDNSAAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-18 | 56 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 9e-18 | 53 |
