Gene Information

Name : HMPREF9231_0189 (HMPREF9231_0189)
Accession : YP_005837565.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 1.17.4.1
Position : 213064 - 215286 bp
Length : 2223 bp
Strand : -
Note : -

DNA sequence :
ATGAATAGCACGGATCCGATGAGCGAATCTACTTCGCTTAATCTTGATCACACTGACGACACCAACACTGCTAGCAGCAC
AGCAGAGCGCATTCGCAACAGCCGCGACTACCACGTTCTTAACGCTATGCTCGGTCTTTTCGACCCAGAAAAAGGTATTC
AGTTTGATAAAGATCAGGAAGCAGAAAAGCTTTACGTTTCGGGTTACGTGCAAGAACACAGCATGAAGTTTGCTTCAACT
CATGAGCGCTTGAACTATTTGATTAGCAACTACTACTACAACGGAAACGTGTTCGGCAAGTATAGCAGCGAGTTTCTAGA
TAAGTTCTACGAGCACGCGGAATCTGCTCACCACACTTTTGGCACATTCTTGGGTGCTTTTAAGTTCTACACTTCTTACG
CTTTGAAGACTTTCGACGGCAAGCAATATTTGGAAAACTTCGCTCAGCGCGCAGCTGCAGTCGCTTTGGAACTTGCAGAC
GGAGACGAAAAAGCAGCGCTCAACTATTTGGACGAGATGCTTGCAGGTCGATTCCAGCCAGCCACTCCAACGTTCTTGAA
TCTTGGTAAAGCTCAGCGCGGAGAGGCTGTGAGCTGCTTCCTCGTGCGTTTGGAAGATAATATGGAGTCTATTGCACGCG
GAATTAACTCTGCTTTGCAGCTTTCTAAGCGCGGCGGCGGCGTGGCTCTGCTTCTTACGAATTTGCGCGAGCTTGGTGCT
CCTATTAAGCGCATCGAAAATCAGTCGAGTGGCGTTGTGCCTGTTATGAAGCTTTTGGAAGATTCATTCTCTTATGCTAA
TCAGCTTGGCGCTCGTCAGGGCGCTGGTGCCGTGTATATTAGCGCTCACCACCCAGATATTATGCGTTTCCTTGACACTA
AGCGCGAGAACGCGGACGAGAAGATTCGTATTAAGTCGCTTTCTTTGGGTGTTGTGATTCCAGATATTACTTTTGAGCTT
GCTAAGCGTAAGGAAAAGATGGCTTTGTTTAGCCCTTACGACGTTGAGCGCGAATATGGCAAGCCTTTTGCAGACATTTC
TGTTACTGAGCATTACGATGAGATGGTTGCAAATCCTCGCATTCACAAGAAGTACATTGATGCTCGCGAATTCTTTATGA
CGCTTGCGGAGATTCAGTTTGAGTCTGGCTACCCTTACATTTTGTTTGAAGATACTGTAAATCGCACAAATCCTATTGAA
GGCCGCATTACTATGAGCAACTTGTGCTCCGAGATTTTGCAAACTCAAGAAGCAAGCACTTATAACGCCGACTTGTCTTA
TAGCCACGTTGGTCGCGATATTTCTTGCAATCTTGGCTCGCTTAATATTGCTAAGGCGATGGACGGTGACTTGGGTACAA
GCGTTGATTTGGCTGTGCGCGCGCTCACGTCTGTTTCGGAGCATACTTCGATTGATTCCGTGCCTTCGATTCGTCGCGGA
AACGCAGAGGGCCATGCTATTGGCTTGGGTCAAATGAATTTGCACGGTTTCCTTGCTCGCGAGCACATGCAGTACGGAAG
CGAGGAAGCTCTTGACTTTACAGACATGTACTTTATGACGGTTGCTTACCACGCTTATAAGGCTTCTCACGCTTTGGCTG
TAGAGCGCGGGACTGCTTTTGCAAGCTTTAAGACTAGCGCTTACGCTAAGCCTGCAGGAAAAGGCAACTACTTCGATAAG
TACACTGATGGCAGCCGCTCGCTTGAGCCTAAAACTCAAAAGGTTCGCGATTTGTTTGCTCGTTTTAACGTTGCAATTCC
AACCGTTTCGGATTGGGAGCAATTGCGCGACGAGATTTTGCGCGATGGCATTTACAACGAGTATTTGCAGGCTGTTCCTC
CAACTGGTTCCATATCGTACATAAACCATTCCACGAGTTCAATACACCCGATTGCTTCTCGCATTGAGATTCGCAAAGAG
GGCAAAGTTGGCCGCGTCTACTACCCTGCTGCATACATGACGAATGACAATATGCAGTACTTTAAGGATGCTTACGAGAT
TGGTTGGAAGGCAATTATTGACACTTACGCGGAGGCAACTCAGCATGTAGATCAGGGATTGTCTCTTACTTTGTTCTTCC
CAGACACTACGACTACTCGCGATTTGAACAAAGCTCAGATTTACGCGTGGCGTAAGGGTATTAAGACTCTTTACTACATT
CGTATTCGCCAGAAGGCTTTGGAAGGTACAGAAATCGAGGGTTGCGTAAGCTGCACGCTGTAA

Protein sequence :
MNSTDPMSESTSLNLDHTDDTNTASSTAERIRNSRDYHVLNAMLGLFDPEKGIQFDKDQEAEKLYVSGYVQEHSMKFAST
HERLNYLISNYYYNGNVFGKYSSEFLDKFYEHAESAHHTFGTFLGAFKFYTSYALKTFDGKQYLENFAQRAAAVALELAD
GDEKAALNYLDEMLAGRFQPATPTFLNLGKAQRGEAVSCFLVRLEDNMESIARGINSALQLSKRGGGVALLLTNLRELGA
PIKRIENQSSGVVPVMKLLEDSFSYANQLGARQGAGAVYISAHHPDIMRFLDTKRENADEKIRIKSLSLGVVIPDITFEL
AKRKEKMALFSPYDVEREYGKPFADISVTEHYDEMVANPRIHKKYIDAREFFMTLAEIQFESGYPYILFEDTVNRTNPIE
GRITMSNLCSEILQTQEASTYNADLSYSHVGRDISCNLGSLNIAKAMDGDLGTSVDLAVRALTSVSEHTSIDSVPSIRRG
NAEGHAIGLGQMNLHGFLAREHMQYGSEEALDFTDMYFMTVAYHAYKASHALAVERGTAFASFKTSAYAKPAGKGNYFDK
YTDGSRSLEPKTQKVRDLFARFNVAIPTVSDWEQLRDEILRDGIYNEYLQAVPPTGSISYINHSTSSIHPIASRIEIRKE
GKVGRVYYPAAYMTNDNMQYFKDAYEIGWKAIIDTYAEATQHVDQGLSLTLFFPDTTTTRDLNKAQIYAWRKGIKTLYYI
RIRQKALEGTEIEGCVSCTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 66