Gene Information

Name : HMPREF9231_0150 (HMPREF9231_0150)
Accession : YP_005837526.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 170620 - 171645 bp
Length : 1026 bp
Strand : -
Note : -

DNA sequence :
ATGTCAGAATTTAATATTAATCTTTTCGAATCACAATTCACTGAATCAGTAAAAGAAATATTACACAATAATGAATGGTC
TGTTACCACGAAACAATATCCTCAAGGTATTGCATCCTTGACAATACATAATTCTAGAGGATATGTTGAAGTGCTTCCAT
TCATGGGACAGATTATTTGGGATGCAAATTTTGATGGTAAAAGTTTGAGAATGGATAACATGTTCTCAAAACCTAAACCA
GCAAACCAAATTGTTAACACATACGGGTGCTTTGCATTCCATTCTGGACTTTTAGCTGCAGGGTGCCCTTCTCCGGAAGA
TACGCATCCTTTACACGGTGAATTCCCATGCTCGCATATGGATAATGCAAAATTAATTATTACCGAGACATCTATAACAA
TTGAATCTTCCTACGAATACTTACAGGGCTTTGGTGATCACTATGTTGCAAAACCTTCAGTAACTTTACACGAAGGTTCT
TCAATGTTTGATATTCATTTAGAAGTAACCAATAAGTCACTATATGCGTCAATGCCACTACAGTACATGTGCCACATGAA
CTATGCATTTGTAAAGGACGCTAAAATAACACAAAACTTTGGCAATGACACATTCAAGTTACGAACATCTATTCCTGCTC
ACGTAAAGCCAACTCCAAGATGGACACAACTTAATGAAGACATACTAAGTGGTAAAAAAGATGCTAATTCATTAGTAGGA
GCAGAAGAATTTGATCCAGAAATTGTCTACTTTGCGGATGGAGTAAACAAAATTACGGACAATGCAATTATTGATATGGT
TGCTCCAGACGGTACTACATTCGAAACACAATTCTCCACGCAAGAATTCCCTGTTGTGACCAGATGGATTCTTTACAATG
CAGATCAAAAAGTTGCAGCTTTTGCTCTGCCTGGAACATCTAGGCCAGAAGGTCGCGAAGCTGCTAGGAAAGCTGGCACA
TTGATTCAATTAAATCCTGGCGAAACAAAGAAATTCACTGTTCATACTGGAATTAAGGAGAAGTAA

Protein sequence :
MSEFNINLFESQFTESVKEILHNNEWSVTTKQYPQGIASLTIHNSRGYVEVLPFMGQIIWDANFDGKSLRMDNMFSKPKP
ANQIVNTYGCFAFHSGLLAAGCPSPEDTHPLHGEFPCSHMDNAKLIITETSITIESSYEYLQGFGDHYVAKPSVTLHEGS
SMFDIHLEVTNKSLYASMPLQYMCHMNYAFVKDAKITQNFGNDTFKLRTSIPAHVKPTPRWTQLNEDILSGKKDANSLVG
AEEFDPEIVYFADGVNKITDNAIIDMVAPDGTTFETQFSTQEFPVVTRWILYNADQKVAAFALPGTSRPEGREAARKAGT
LIQLNPGETKKFTVHTGIKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoM ADD91724.1 deoxyribose specific mutarotase DeoM Not tested PAI-I AL862 Protein 5e-79 52
unnamed CAE85171.1 hypothetical protein Not tested PAI V 536 Protein 1e-78 52