Gene Information

Name : asd (HMPREF9231_1322)
Accession : YP_005838626.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Unknown
Product : aspartate-semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.11
Position : 1621323 - 1622390 bp
Length : 1068 bp
Strand : -
Note : -

DNA sequence :
ATGGCAATCATAAGCAATACAGGCGTAAACCTTGCGGTTTTAGGTGCGACGGGTCAGGTTGGAATGGTTATGCGTCGCGT
ATTATATGAGCGCGATTTTCCAATTAAAAACTTGCGATTTTTGGCTTCCGCGCACTCCGCTGGAACTGTTTTGAACTATC
GAGGTAAAGATGTTGTTGTAGAAGATGTAGAAAAAGCAGATTTAAGCGGAATTGACATTGCGATTTTCTCCGCAGGCGGC
GGAACATCCAAAGTGTGGGCACCGCGATTTGCAGATGCGGGTGCAATAGTAATAGATAATTCTTCTCAATGGCGTATGCA
TAACGATGTTCCGCTGGTAGTTGCAGAAGTAAACCCAGAAGATTTAAATGATATTCCGCGTGGAATAGTGGCAAATCCTA
ATTGCACAACAATGGCGTGCATGCCTGTTTTAAAACCGCTTTCTGACGCTTTTTGTCTAAGGCGACTTATTGTATCTTCT
TATCAGGCAGTTTCTGGAGCTGGTAGAGCTGGAGCATTGCAGCTTATGGACGAAGCGCAAGCTGCCTTAGATCAGGGCGC
GGATAAGCTTGTGTTTGATGGAGATGCTATTGATTTTCCGCAGCCAACCAAAGTTGCGCGCACAATTGCATTCAACGTTG
TGCCATTTATTGGCGCGATTGTTGAGGACGGATCGCAAGAAACCGACGAAGAGCAAAAGCTTCGCAACGAAAGTCGTAAG
ATTCTTCATCTGCCAAAGCTCGCAGCAAGCTGCACATGCGTGCGCGTGGGCGTTTTTACAGGTCACGGAATGAGCATTAA
TGCCGAATTTGAGCGCGATGTAACTCCAGATATGGCTCGCAAAGTATTAAGCAAGGCTCCGGGAGCCGAGCTTAGCGATA
TTCCTACTTCGCAACTTGCTGCAGGAAAGTCTGCAAGCTACGTTGGGCGTATTCGCCAAGATCAAGCGGTTGATGGAAAG
CACGGATTGGCAATGTTTATTACAAATGACAATCTTCGTAAGGGTGCTGCTCTTAACGCTGTGCAATTGGCGGAAATCGT
AGCTAAAAAACGACACTTTGTGGATTGA

Protein sequence :
MAIISNTGVNLAVLGATGQVGMVMRRVLYERDFPIKNLRFLASAHSAGTVLNYRGKDVVVEDVEKADLSGIDIAIFSAGG
GTSKVWAPRFADAGAIVIDNSSQWRMHNDVPLVVAEVNPEDLNDIPRGIVANPNCTTMACMPVLKPLSDAFCLRRLIVSS
YQAVSGAGRAGALQLMDEAQAALDQGADKLVFDGDAIDFPQPTKVARTIAFNVVPFIGAIVEDGSQETDEEQKLRNESRK
ILHLPKLAASCTCVRVGVFTGHGMSINAEFERDVTPDMARKVLSKAPGAELSDIPTSQLAAGKSASYVGRIRQDQAVDGK
HGLAMFITNDNLRKGAALNAVQLAEIVAKKRHFVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0195 YP_005126708.1 aspartate-semialdehyde dehydrogenase Not tested Not named Protein 3e-83 58