Gene Information

Name : HMPREF9231_1158 (HMPREF9231_1158)
Accession : YP_005838471.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Unknown
Product : Ham1 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1402992 - 1403684 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence :
GTGAAACTTGTTGTGGCAACGCATAATGAGGGTAAACTCGTTGAAATTAAGCGGATTCTTAACGAAGAGTTTGCGGAAAT
GTCGGAGCATATTGAGCTTGTTACTGCTGGCTCTTTGGGGCTTCCAGATCCAGTAGAAACAGGCGTGACTTTTGAGCAAA
ATGCGTTAATCAAAGCTAGAGATGTTTCTTTAAGAACTGGTTTGCCTGCAATAGCAGATGATTCAGGTTTGATTGTAGAT
GTTCTCGGAGCTGCTCCAGGAATATTGTCTGCGCGTTGGAGCGGTGTTCATGGAGATGATAAGGCGAATAATGAGCTTTT
GCTTAAACAGCTTGAAGACATTCCAGATCAGTGTAGAACAGCACGATTCCGCTGTGCTGCAGCTTTAGCTATTCCTAAGG
GTTGTGGTGAAACAGAACTTGAAAACAGTATGTGGAAAACAAATGGTTTTGAAACTGTTCGCGTTGGAGAAATGGTTGGT
AGACTGATTAGAGTTCCACGCGGAGAGAATGGTTTTGGTTACGATCCGCTTTTTGTACCAGATAATCAGCCTGTTAGAAA
TGGCATTCAAATGCAGGATTTGACAAGTGCTCAGCTTAGTCAAGAAGAGAAGAACGCCATTTCACACAGGGGCAGTGCGT
TACGAGCGCTTTTGCCAGAGTTAAAAGCTATGTTCCTTGGGCAAACTAAGTAA

Protein sequence :
MKLVVATHNEGKLVEIKRILNEEFAEMSEHIELVTAGSLGLPDPVETGVTFEQNALIKARDVSLRTGLPAIADDSGLIVD
VLGAAPGILSARWSGVHGDDKANNELLLKQLEDIPDQCRTARFRCAAALAIPKGCGETELENSMWKTNGFETVRVGEMVG
RLIRVPRGENGFGYDPLFVPDNQPVRNGIQMQDLTSAQLSQEEKNAISHRGSALRALLPELKAMFLGQTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 3e-35 45