Gene Information

Name : HMPREF9231_1045 (HMPREF9231_1045)
Accession : YP_005838366.1
Strain : Gardnerella vaginalis HMP9231
Genome accession: NC_017456
Putative virulence/resistance : Unknown
Product : amidohydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1254068 - 1255297 bp
Length : 1230 bp
Strand : +
Note : -

DNA sequence :
ATGCTGCAACTTACGGCAGTTCAGAAGATATTATCCGATTTAGATGAAACCCAATCAGAACGAGAAAGACAATACAAATA
CTTTCATCAACATCCTGAACTGTCAATGAAAGAAGATCATACAGCTCAAACAATTATTGATATTCTTAGCAAGGCTGGGA
TTGAAACAAAGCAAGTTGGCAAGACAGGCATTGTGGCAGAGATTAAAAACGGCGAAGGTCCTGTTGTTGCTATGAGAGCG
GATATTGATGCGCTTCCAATTAAAGAAAATTCAGGGAAAGATTATACTTCAACAGTTAGCACGCAAGACGAAAATGGCAA
AACGGTTGGAGTTTCACACGCTTGCGGTCACGATTTTCATATTTCCAGCCTACTTGGCGCCTTGAAGGCTTTTAACAAGC
ATAAAGATGCTTGGAGAGGAACGTACATTGGCGTTTTTCAGCCTGGAGAAGAAACAGCTCAAGGCGCAAAATACTTGGTG
GAAAATGGCATTACGAGCATGATTGCAAAGCCTGACGTTTACCTTGGTCAGCATGTGTTGGGTGCTATTCCTGCAGGAAC
AGTCGGTATTCGTTCGGGCGCGTTCTTAACTACTGCAGCTTCGATTCGCGTGCACATTTTTGGTAAAGGTTCACATGGAT
CTATGCCAGAATTAAGCGTTGACCCTGTGGTTTTAGCTTCGTCTATTGTGTTGAAATTGCAGACGATTGTTTCTCGCGAA
CTTGCAGCTAAAGATTACGCAATTGTTACAGTTGGTGCGCTTAATGCAGGAAGTAAGTCGAATATTATTCCTGATGATGC
CGAGCTTTTAATTAACACAAGAACTTATAGCGAAGATACTCAAAAATTTGTACACAATGCTATTGAACGAATTGTGCGTG
GAGAGTGCGAGCTTGCAAGATGTCCTAAGAAACCAGAATTTACATACTATGACCGCTATCCGCTTACGAATAATGATAAG
AATGCGTCTTTGCGCGTGCGTAAAGCTTTTGATGAATACTTTGGAGAAGACTCTGTAAATATTTCGCGCGCTTCTGCTTC
GGAAGATTTTTCTATAGTCGCGAACGCTTTCAATACACCTTACGCATACTGGGGATTAGGTGGATTTGAAGACATGAAAA
ATGCTCCTGGAAATCACAATCCAGCTTTTGCTCCAGATTTGCAACCAACTCTAAATCGTGGACTTGAATCAGCTGTTGTA
GCAGCTTGCGCATGGCTAGCTTGCGACTAA

Protein sequence :
MLQLTAVQKILSDLDETQSERERQYKYFHQHPELSMKEDHTAQTIIDILSKAGIETKQVGKTGIVAEIKNGEGPVVAMRA
DIDALPIKENSGKDYTSTVSTQDENGKTVGVSHACGHDFHISSLLGALKAFNKHKDAWRGTYIGVFQPGEETAQGAKYLV
ENGITSMIAKPDVYLGQHVLGAIPAGTVGIRSGAFLTTAASIRVHIFGKGSHGSMPELSVDPVVLASSIVLKLQTIVSRE
LAAKDYAIVTVGALNAGSKSNIIPDDAELLINTRTYSEDTQKFVHNAIERIVRGECELARCPKKPEFTYYDRYPLTNNDK
NASLRVRKAFDEYFGEDSVNISRASASEDFSIVANAFNTPYAYWGLGGFEDMKNAPGNHNPAFAPDLQPTLNRGLESAVV
AACAWLACD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1464 YP_001800858.1 hypothetical protein Not tested Not named Protein 5e-70 44