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Name : Hprae_0839 (Hprae_0839) Accession : YP_005836153.1 Strain : Halanaerobium praevalens DSM 2228 Genome accession: NC_017455 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 937625 - 939322 bp Length : 1698 bp Strand : + Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR007831; KEGG: hor:Hore_05970 Tfp pilus assembly protein PilB; PFAM: type II secretion system protein E; General secretory system II protein E DNA sequence : ATGGCCAAAAAAAGAGTTAAATTAGGTGAGTTACTAGTAGAACATGAATATATAACTGCTAAAGAATTAAAAGAGGCTTT AAATAAATTAGATAATACAGATAAAAAAATTGGTGAAGTTTTAGTTGAATTAGGATATGTTAAAGAAGAAGATTTAATTG AAGTTTTAGAATTTCAGCGCGGAATTCCTCATGCAGATCTGGATAAATATTTCTTTGATCCTTCTTTAGCAGAATTAATT CCGGAAAATATTGCCAGACGTTATTTAGCAGTACCTATGGAAAAAAGTAGTCAAGGTAAGTTAAAAGTTGTAATGGCAGA TCCAACTGATTTAGTTGCAATTGATGATTTAGAGATGTTAAGTAATTTTAGTGTAGAACCTCTTTATGGAGCACCAAAAC AAATTAGAGCTGCTATTGATAGACTATATGGTAGTGATGAAATAGATATTTCTAATATTTTTGCGGATTTTGATTTAGAA GATTTAGAAGAAGTTTCTGATAATCAAGATGAAGAAATTTATGAAGAAGAACAATTAAGGGAAATGGTTGATGAGGCTCC AATTATTAAACTAGCTAATTATATAATTAGTAAGGCATATCAAAAAGGAGCAAGTGATATTCATATTGAGCCTGAAGAAG ATAAAATAAGGGTTAGGTTTAGAATTGATGGAGTTTTGAAAAAAGAAATGACTGCCCCTAAATCTTCACACAGAGCTTTG GTTTCTAGAATTAAAATTATAGCCAATTTAGATATTACAGAACATCGAGTACCTCAAGATGGCCGGATTAAGATGATTTT TAAAGGTGAAAAACTTGATATGCGAGTTTCAACTTTACCTACGATTAGAGGAGAAAAGGTAGTAATTCGTCTTTTAGCTC AAAATACTAGTTTATTAGATTTAGATAATTTAGGCTTATCAGAATATAATAGAGAAAAATTTGGCAGTTTAATCCAAAAA CCAAATGGGGTTTTATTACTAACTGGTCCAACTGGTAGTGGAAAATCAACAACTTTATTTGCTGCTTTAAATGAGTTAAA TAGTTCTCAAATTAATATGTTAACAATTGAAGACCCAGTTGAATATCAAATACCAGGAATTAATCAGGTTCAAGCTCAAC CTAAAGCTGGTTTAACTTTTGCTAAAACTTTAAGATCTATCTTAAGACAGGATCCTGATATTATAATGATTGGAGAGATG AGAGATCAAGAAACAGCTGAAATTGCTGTGAGATCAGCTTTAACTGGCCATCTAGTTTTTAGTACTCTGCACACTAATGA TGCAGTTAGTTCGATAACTAGATTGACAGATATGGGTTTAGCATCTTATTTAGTAGCTGCTTCTTTAAATGGAGTGGTGG CCCAGCGTTTGGTACGCAAATTATGTCCCCACTGTAAGGAAAAAAGAAAATTAGAAAAAACTGATTTAAAATATTTAAAT CAACCAGAACTAAAAGAAGCATATTTTGCTGTTGGTTGTGAAAAATGTAATAACACTGGTTATAATGGGAGACTTGCTAT TCAAGAAATTTTTGAAATAGATAATCAAGTTAGAGAAATGATTAGTGATAATTATAGTAAAGAAAAAATCAGTGAATACG CAAAATCACAGGGGATGGTAACTTTGAAAGAAGATGGAATAGCAAAGATCAAAAAAGGTGAAACTGATATTTCTGAATTA AGAAGGATTATCTATTAA Protein sequence : MAKKRVKLGELLVEHEYITAKELKEALNKLDNTDKKIGEVLVELGYVKEEDLIEVLEFQRGIPHADLDKYFFDPSLAELI PENIARRYLAVPMEKSSQGKLKVVMADPTDLVAIDDLEMLSNFSVEPLYGAPKQIRAAIDRLYGSDEIDISNIFADFDLE DLEEVSDNQDEEIYEEEQLREMVDEAPIIKLANYIISKAYQKGASDIHIEPEEDKIRVRFRIDGVLKKEMTAPKSSHRAL VSRIKIIANLDITEHRVPQDGRIKMIFKGEKLDMRVSTLPTIRGEKVVIRLLAQNTSLLDLDNLGLSEYNREKFGSLIQK PNGVLLLTGPTGSGKSTTLFAALNELNSSQINMLTIEDPVEYQIPGINQVQAQPKAGLTFAKTLRSILRQDPDIIMIGEM RDQETAEIAVRSALTGHLVFSTLHTNDAVSSITRLTDMGLASYLVAASLNGVVAQRLVRKLCPHCKEKRKLEKTDLKYLN QPELKEAYFAVGCEKCNNTGYNGRLAIQEIFEIDNQVREMISDNYSKEKISEYAKSQGMVTLKEDGIAKIKKGETDISEL RRIIY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-92 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-92 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hprae_0839 | YP_005836153.1 | type II secretion system protein E | VFG0182 | Protein | 9e-89 | 47 |
| Hprae_0839 | YP_005836153.1 | type II secretion system protein E | VFG2048 | Protein | 4e-94 | 42 |
| Hprae_0839 | YP_005836153.1 | type II secretion system protein E | VFG1880 | Protein | 7e-86 | 42 |
