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Name : Hprae_R0010 (Hprae_R0010) Accession : YP_005835917.1 Strain : Halanaerobium praevalens DSM 2228 Genome accession: NC_017455 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 673513 - 673989 bp Length : 477 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037:IPR020081; KEGG: hor:Hore_15720 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; tmRNA as predicted by Rfam (RF00023), score 228.88; PFAM: SmpB pro DNA sequence : ATGGCTAAGAAAAAAGAAATAGATATTATTGCAAGAAATAAAAAAGCAAGACATGATTTTTATATAGAAGAAACCTATGA AGCTGGAATCAAACTTAAAGGTACAGAAATTAAATCTATTCGTAATCATAAAGTTAATTTAAAAGATAGTTTTGCTTTAG TTAGAAATGGAGAAGTTTATCTGCATAATATGCATATTAGTCCTTATAAAGAAGGCAATCGTTATAATCATCGCCCTGAA AGAAGAAGAAAACTTTTATTGCATAAAAATGAAATTAGAAAATTAATTGGATATACAACTCAAAAGGGTTATACCTTAGT ACCTTTAACTCTTTATTTGAAAAAAAATATTTGTAAAGTAGAATTAGCTGTGGCAAAAGGTAAGCAGCAGCATGATAAGC GGAGAGATATTGCTAAAAAAACAGCTAAAAGGGAAATGGAAAAAGCTTTTAGACGCCGTCAAAAAGGTGATATTTAA Protein sequence : MAKKKEIDIIARNKKARHDFYIEETYEAGIKLKGTEIKSIRNHKVNLKDSFALVRNGEVYLHNMHISPYKEGNRYNHRPE RRRKLLLHKNEIRKLIGYTTQKGYTLVPLTLYLKKNICKVELAVAKGKQQHDKRRDIAKKTAKREMEKAFRRRQKGDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-35 | 60 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 6e-28 | 49 |
