|
Name : Hprae_0334 (Hprae_0334) Accession : YP_005835650.1 Strain : Halanaerobium praevalens DSM 2228 Genome accession: NC_017455 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 385664 - 386965 bp Length : 1302 bp Strand : + Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: mmq:MmarC5_1312 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase DNA sequence : GTGAATATTAATAACATTAAAATAGCAATTACAGGAATGGGATATGTTGGATTACCATTATCAGTTGCATTTGCAGAAAA GGGACTAGATATTATTGGCTTTGATATCAATGAAAATAAAATATCAAAATATCAAAAAGGTGAAGATTCAACAAATGAGA TTGGTAAAGAAAGACTTTCAAAAATAGATAATATAAAATATACAGCTGATGAAAAAGATTTAAAAGCAGCAAATTTTCAT ATAGTTGCTGTACCTACTCCTGTTGGGAAGAATAATGTACCCAATTTAGACCCGGTAACCGGAGCAAGTAGAATTGTAGG AAGAAATTTAACAGAAGGGGCTATTGTTGTTTATGAGTCAACTGTTTATCCTGGAGTTACAGAAGAAGTTTGTGTTCCAA TTTTGGAAGAGGAATCTGGTTTGGAATGTGGTATAAATTTCAAAGTTGGTTATTCACCGGAAAGAGTGAATCCTGGTGAT AAGGTTAATACTGTAGAAAAAATAGTTAAGGTTGTTTCTGGTATGGATGAAGAAAGCCTTGCTACAATTGCTAGTGTTTA TGAAGAAATAATTGAAGCTGGTGTACATAGAGCACCTTCAATAAAGGTTGCAGAAGCTTCTAAAATAATTGAGAATTCTC AACGTGATGTTAATATTGCTTTTATGAACGAGTTATCTATGATTTTTGATAAAATGAATATTGATACTCAGGCGGTTTTG GATGCAGCTGGAACCAAATGGAATTTTCTTAATTTTTATCCTGGTTTAGTTGGGGGCCATTGTATAGGTGTGGATCCTTA TTATTTAACATATCGTTCAGAAGAATTGGGTTACATATCTCAGTTGATTTTAAATGGACGTAGAATTAATGATCAAATGT CAAATTTTGTGGCGGAGAAAACTGTTAAGAAAATGATAGAATCAAATGTAAAGGTTAATGGTTCTACTGTTTTAGTGATG GGACTGACATTTAAAGAGAATGTGCCTGATTTGAGGAACAGTAAGGTTGCTGATGTGATAGAAAGACTGGAAGAATATCA TATTAATGTTAAAGTTGCTGATCCTATTGCTGACCCAGAAGAATCTGTAGTTGAGCATGGAATTGAGTTAGAAAATTTAT GTACAATTAATAATGTTGATGCAATTATTGTTGCAGTTAATCATAAAGAATATCAAAAAATAGAACTTAAGGATTTCAAA AGATATTATAAAGAGTGTATCGATAAACCTGTTTTTATTGATGTTAAGTCAATTTATAATAGTAATAAAGCTGAAAAAAT GTATAATTATTGGAGACTTTAA Protein sequence : MNINNIKIAITGMGYVGLPLSVAFAEKGLDIIGFDINENKISKYQKGEDSTNEIGKERLSKIDNIKYTADEKDLKAANFH IVAVPTPVGKNNVPNLDPVTGASRIVGRNLTEGAIVVYESTVYPGVTEEVCVPILEEESGLECGINFKVGYSPERVNPGD KVNTVEKIVKVVSGMDEESLATIASVYEEIIEAGVHRAPSIKVAEASKIIENSQRDVNIAFMNELSMIFDKMNIDTQAVL DAAGTKWNFLNFYPGLVGGHCIGVDPYYLTYRSEELGYISQLILNGRRINDQMSNFVAEKTVKKMIESNVKVNGSTVLVM GLTFKENVPDLRNSKVADVIERLEEYHINVKVADPIADPEESVVEHGIELENLCTINNVDAIIVAVNHKEYQKIELKDFK RYYKECIDKPVFIDVKSIYNSNKAEKMYNYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-104 | 54 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-91 | 49 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-91 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hprae_0334 | YP_005835650.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 5e-92 | 49 |
