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Name : Hprae_0324 (Hprae_0324) Accession : YP_005835640.1 Strain : Halanaerobium praevalens DSM 2228 Genome accession: NC_017455 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : - COG ID : - EC number : - Position : 374372 - 375796 bp Length : 1425 bp Strand : + Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: hor:Hore_16980 nucleoside-diphosphate sugar epimerase; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosy DNA sequence : ATGAAAAATGTTTTAATTGTAGGTGCTGGTAGTGCCGGCAAGCATGTCTTAAAAGAAATAACAAATAACGGACATAAATA TGACTATAATGTAATTGGCTTTTTAGATGCAGATTCTTCAAAGCATGGAAATGAAATTGATGGCTATGAAATATTAGATC ACCACGATAATATAAATAAATATATTGATGAATTTGATATAAATGAAGTTATTGTTGCAACTACTGAAATTAATCATCAA GGATTAAATAAAATTTATGATAACTTAAAAACTTTTGATAAAAATATTGAAATAAAAGTTCTTCCTACAGTAGAAGAACT CTTAAAAGGTGAACCTTTTACTAAGCAGTTAAGAGAAGTGCAGGTGGAGGATTTACTGGGGAGAGAATCAATACAGATTA ACAATGAGAATATTAATAAATACATAAATAATAAAAAAGTATTAGTAACAGGCGCTGCAGGATCTATTGGCAGTGAATTA TGCAGGCAGATTGTTAAATATAATCCAAAAGAATTAATAATATTAGATATAAATGAAAATGACTTATATTTTTTAAAATT ATTTTTAGAAAGACATTATGAAGTTGAAATTAATTTTGAAATAGCAAATATTAGAGAAAAAGATAAATTAGAGTTTTTGT TTAAAGAATATAAACCTGATTTAGTTTATCATGCAGCAGCTCATAAACATGTTCCATTAATGGAAAAAAACATAGAAGAA GCTGTAAATAATAATGTTTTTGGATCTAAAAATTTGCTAGAGATGGCAGATAAATATCAGGTAGAAAAGTTTGTTTTGAT TTCTACAGATAAAGCGGTTAACCCAACTAATGTTATGGGAGCAACGAAACGCTTATCAGAAATTATTTTAGAAAATATAA ATAAAAATTCTAAAACTATGTATATGGCAGTTAGATTTGGAAATGTTTTAGGAAGTAATGGTAGTGTTGTACCATTATTT AAATCTTTAATAAAAGAGGGTAAGGATTTAACAGTAACCCATGAAGAAGTAACCCGCTATTTTATGACAATTCCAGAAGC TGCTCAACTTGTTTTGGAAGCTGGCTATATAGGCCAGGGTGGAGAAGTATTTGTACTAGATATGGGCAAACCAATTAAAA TCATGGATCTGGCAGAGAAAATGATTGAACTATCCGGTCTGAGAGTAGGCAAAGATATTGACATTAAAATTACGGGCCTT AGACCTGGAGAAAAACTTTATGAAGAACTTTTATATGATATAGATAGCTGTCAGAAAACTGAGAATGATAAAATTTATAT CTCTCAGATCAGAAGAGAAGATTTAGATTTAGAAAAAGGATTAAATGAACTGAACATTTATTTAAATAACTTTGACAGAA TTAACTTAAAAAAACAACTTAAAAAGTTAGTTACAACATATAAAGAAGCTGAATATAATAACTAG Protein sequence : MKNVLIVGAGSAGKHVLKEITNNGHKYDYNVIGFLDADSSKHGNEIDGYEILDHHDNINKYIDEFDINEVIVATTEINHQ GLNKIYDNLKTFDKNIEIKVLPTVEELLKGEPFTKQLREVQVEDLLGRESIQINNENINKYINNKKVLVTGAAGSIGSEL CRQIVKYNPKELIILDINENDLYFLKLFLERHYEVEINFEIANIREKDKLEFLFKEYKPDLVYHAAAHKHVPLMEKNIEE AVNNNVFGSKNLLEMADKYQVEKFVLISTDKAVNPTNVMGATKRLSEIILENINKNSKTMYMAVRFGNVLGSNGSVVPLF KSLIKEGKDLTVTHEEVTRYFMTIPEAAQLVLEAGYIGQGGEVFVLDMGKPIKIMDLAEKMIELSGLRVGKDIDIKITGL RPGEKLYEELLYDIDSCQKTENDKIYISQIRREDLDLEKGLNELNIYLNNFDRINLKKQLKKLVTTYKEAEYNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-77 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-74 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hprae_0324 | YP_005835640.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 6e-75 | 45 |
