Gene Information

Name : Hprae_2076 (Hprae_2076)
Accession : YP_005837355.1
Strain : Halanaerobium praevalens DSM 2228
Genome accession: NC_017455
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 2279708 - 2280874 bp
Length : 1167 bp
Strand : -
Note : COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose deh

DNA sequence : 
ATGAAAATTACGGTTGCTGGGGCAGGTTATGTTGGGCTTTCTAATGCAGTTTTACTTGCTCAAAACCATGAAGTCACAGC
AGTAGATGTAGTTTCTGAAAAAGTAGAAATGATTAATCAAAGAAAATCACCGATAGTTGATGCAGAGTTGGAAGATTATT
TAGCAAACAAGGAATTAAATTTAGAAGCAACAACTGATTCTTTAAAAGCTTATCGGGAAGCTGATTATGTAGTTATTGCA
ACACCAACTAACTATGATCCAGAACAAAATTATTTTAATACCAGAACAGTTGAGGCTGTTGTAGCGAATGTGCTTTCTTT
TAATGAGGATGCTGTTATGATTATCAAATCAACAGTTCCAGTTGGTTATACAGCAGAGCTGCGAGAAAAATTTGATACAG
AAAATATAATTTTTTCACCAGAATTTTTAAGAGAAGGTAAAGCTCTTTATGATAATCTTTATCCTTCCCGAATTATTGTT
GGTGAAAGATCAAAAAGAGCAAAGGAATTTGCTAATTTATTAGTCGAAGGAGCCCTAAAAAAAGATATTGATCTTTTATT
TACAGATTCCACTGAAGCTGAGGCCATTAAATTATTTGCTAATACATATTTAGCAATGAGAGTTTCATTTTTTAACGAAC
TAGATACTTATGCTGAAGTCCGCGGCTTAGATAGTAAACAAATAATTGAAGGTGTTGGCCTAGATCCAAGGATTGGAGAT
CACTATAATAATCCTTCTTTTGGTTATGGAGGCTATTGTTTGCCTAAAGATACTAAACAGTTATTAGCTAATTACGAAAA
TGTGCCAAATAATATTATGCAGGCAATTGTAGATGCAAATAGAACCAGAAAAGATCATATAGCTAAGATGATTGTGCAGC
AAAAGCCTGAAAAAGTAGGAGTTTATCGTTTAACTATGAAGAAAAACTCAGATAACTTTAGGCAGTCATCAGTTCAGGGA
GTTATGAAAAGAATCAAAGCTAAAGGAATAGAAGTAGTAGTTTATGAACCAACTTTAGCTGCTGATGATTTTTATAGATC
AAAGGTTATTAAAGATTTAGAAGAATTTAAGGCCCAGTCGGAAATTATTATTGCTAATCGAATGGCACCTGAATTAAAAG
ATGTTGAAGAAAAAGTTTATACCAGAGATCTATTTAATAATAATTAA

Protein sequence : 
MKITVAGAGYVGLSNAVLLAQNHEVTAVDVVSEKVEMINQRKSPIVDAELEDYLANKELNLEATTDSLKAYREADYVVIA
TPTNYDPEQNYFNTRTVEAVVANVLSFNEDAVMIIKSTVPVGYTAELREKFDTENIIFSPEFLREGKALYDNLYPSRIIV
GERSKRAKEFANLLVEGALKKDIDLLFTDSTEAEAIKLFANTYLAMRVSFFNELDTYAEVRGLDSKQIIEGVGLDPRIGD
HYNNPSFGYGGYCLPKDTKQLLANYENVPNNIMQAIVDANRTRKDHIAKMIVQQKPEKVGVYRLTMKKNSDNFRQSSVQG
VMKRIKAKGIEVVVYEPTLAADDFYRSKVIKDLEEFKAQSEIIIANRMAPELKDVEEKVYTRDLFNNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-92 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hprae_2076 YP_005837355.1 nucleotide sugar dehydrogenase VFG0963 Protein 1e-100 56