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Name : Hprae_1700 (Hprae_1700) Accession : YP_005836985.1 Strain : Halanaerobium praevalens DSM 2228 Genome accession: NC_017455 Putative virulence/resistance : Unknown Product : transcription antitermination protein nusG Function : - COG functional category : - COG ID : - EC number : - Position : 1860181 - 1860750 bp Length : 570 bp Strand : - Note : COGs: COG0250 Transcription antiterminator; InterPro IPR015869:IPR006645:IPR005824:IPR001062; KEGG: hor:Hore_01040 NusG antitermination factor; PFAM: NGN domain-containing protein; KOW domain protein; SMART: NGN domain-containing protein; KOW domain prote DNA sequence : ATGAGTGAAGAAAGTAAGTTTAATCAAGAAATGGAAAAAGGAAAAGATGATATTCCTTGGTATGTTGTTCATACATACTC AAGTCATGAAAGAAAAGTTAAGGCAAATCTTGAAAAAAGAATAGCCAGTACAGGTATGGAAGATAGTATTTTTAGAATAT TAGTTCCAACTGAAAAAAAGATTGAAAAGAAAAAAGGGAAAGATGAAGTTGTTAAAAAAAGGATTTTTCCCGGCTATATT TTATTGCAAATGAAAATGAACGATAAATCTTGGTATGTTGTCAAAAATACACCTGGAGTTATTGGTTTTGTTAGTGGAGG TACTAAACCTTTACCCGTTGCTAAAGAAGAAGTTGATGCAATTTTAAGTAGTATGGGTGAAAAAGCTAAAAAAGTTTCTG TTGACTTTGAAATTGGGGATCAAGTAACTGTAAAACATGGTCCTTTTGAAGATTTTGATGGAGTTATTAAAGAAATTCAT CCAGAACAGGGTAAAGCTAAAATTTTAGTTTCAATGTTTGGACGTGAAACTCCTGTTGAACTAGAGTTTGATCAATTCGA AAAACACTAG Protein sequence : MSEESKFNQEMEKGKDDIPWYVVHTYSSHERKVKANLEKRIASTGMEDSIFRILVPTEKKIEKKKGKDEVVKKRIFPGYI LLQMKMNDKSWYVVKNTPGVIGFVSGGTKPLPVAKEEVDAILSSMGEKAKKVSVDFEIGDQVTVKHGPFEDFDGVIKEIH PEQGKAKILVSMFGRETPVELEFDQFEKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 3e-29 | 41 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 3e-29 | 41 |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 6e-28 | 41 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 2e-24 | 41 |
