Gene Information

Name : Hprae_0148 (Hprae_0148)
Accession : YP_005835466.1
Strain : Halanaerobium praevalens DSM 2228
Genome accession: NC_017455
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 174728 - 175606 bp
Length : 879 bp
Strand : -
Note : COGs: COG0214 Pyridoxine biosynthesis enzyme; InterPro IPR001852; KEGG: tte:TTE0823 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Pyridoxal biosynthesis lyase pdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: SOR/SNZ

DNA sequence : 
ATGTCAGAAAAATATCGTCTAAACAAAAACTTAGCTCAAATGTTAAAAGGTGGAGTTATTATGGATGTAACCACTGCTGA
AGAGGCAAAAATTGCCGAAGAAGCAGGTGCAGTTGCTGTGATGGCCCTAGAAAAAGTTCCAGCTGATATTCGCAAAGAAG
GTGGAATTGCTAGAATGTCTGATCCAGAAATGATTAAAGAAATTGTAGAAACCGTATCAATTCCAGTAATGGCTAAAGTT
AGAATTGGACATTTTGTAGAAGCTCAAATATTAGAATCTTTAGAAATTGATTATATTGATGAAAGTGAAGTTTTAACTCC
AGCTGATGAAGCTTTTCATATTGATAAAAGAAAATTTGAGATTCCTTTTGTTTGTGGAGCCACCAATTTAGGTGAAGCTT
TAAGAAGAATTGGTGAAGGAGCAGCAATGATTAGAACTAAAGGAGAAGCTGGGACTGGTAATGTAGTTGAAGCAGTACGC
CATATGCGAAAAATTAATTCCCAAATTAAGAGATTAACTACTTTAGATAGTGAAGAATTAATGACAGCAGCCAAAGATAT
GCAGGCTCCTTTTGCATTAGTAGAATATGCTGCTGAAAACGGAAAATTACCAGTAGTTAATTTTGCTGCCGGAGGTATTG
CAACACCAGCAGATGCTGCTTTAATGATGCAGTTAGGTTGTGATGGTGTCTTTGTTGGTTCAGGTATTTTCCGTTCTGGT
AATCCTGTTAAAAGAGCAGCTGCAATTGTCAAAGCAACAACTCATTTTGATGATCCAAAAATCATTGCTGAAGCATCTGA
AAATCTTGGTAAAGCAATGTCTGGTATTGATATTAATGGTTTAACAGATGCCGAAAAAATGGCTGATCGGGGCTGGTAA

Protein sequence : 
MSEKYRLNKNLAQMLKGGVIMDVTTAEEAKIAEEAGAVAVMALEKVPADIRKEGGIARMSDPEMIKEIVETVSIPVMAKV
RIGHFVEAQILESLEIDYIDESEVLTPADEAFHIDKRKFEIPFVCGATNLGEALRRIGEGAAMIRTKGEAGTGNVVEAVR
HMRKINSQIKRLTTLDSEELMTAAKDMQAPFALVEYAAENGKLPVVNFAAGGIATPADAALMMQLGCDGVFVGSGIFRSG
NPVKRAAAIVKATTHFDDPKIIAEASENLGKAMSGIDINGLTDAEKMADRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-84 68
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-84 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-84 68