Gene Information

Name : Hprae_1363 (Hprae_1363)
Accession : YP_005836656.1
Strain : Halanaerobium praevalens DSM 2228
Genome accession: NC_017455
Putative virulence/resistance : Unknown
Product : C4-dicarboxylate anaerobic carrier
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1507449 - 1508990 bp
Length : 1542 bp
Strand : -
Note : COGs: COG1288 membrane protein; InterPro IPR018385; KEGG: fnu:FN2106 transporter; PFAM: C4-dicarboxylate anaerobic carrier-like; SPTR: Arginine/ornithine antiporter; PFAM: C4-dicarboxylate anaerobic carrier

DNA sequence :
ATGTCAGATAATAAAAAGAATACAGCTGAAAAACAAACAAAAAAGAAATTTAGCTTTCCCACGGCTTTTACAGTATTATT
TATAATTTTAGTAATAGCAGCAGGATTAACTTATATTGTCCCTGCAGGACTATACTCAAACTTAGAATATGTACCAGGAA
ATGATTCATTTTTAGTTAAAAGTTCAACAGGTGGAAGTGAAATGATTCCAGCTACCCAAGAAAAGTTAGATGAACTTAAT
GTTAAGATTGATTTACGCAAGTTTAGAGATGGAAGTATTAAAAAACCAATTGCCATTCCAGGTACTTATCAAAAAATAAA
GCAAAGTCCACAAGGCCCATTAGATATAATTATGGCTCCCATTGAAGGTGTAATGGATACAGTAGATATTATGGTTTTTG
TTTTAATTCTTGGTGGAATTATAGGGATCATTAATAAGTCAGGAGCTTTTGATGCAGGGATAGCATTTCTTTCAAAGAAA
ACCGAAGGTAAAGAATTTGTACTTGTAATTTTAGTTTCAGGCTTGATTGCAGTTGGAGGTACTACCTTTGGTTTGGCCGA
AGAAACAATAGCTCTTTATCCAATTTTGATGCCTATCTTTCTTGCTAATGGCTATGATGCTATTGTGGCAATAGCTGCTA
TTTATTTAGGTAGTTCAGTTGGAACAATGTTCTCTACTGTTAATCCATTTTCAGTTGTAATAGCCTCAGATGCAGCCGGT
ATAGCCTTTACAGAGGGAATAGTATTTAGACTAGTTAGTTTAATTTTAGCAATGATTATAACCTTGTTATACATATATTG
GTACTCTAAAAAAATTAAAAAAGATCCTCAAAACTCTTTAGTCTATGAAGACTATGAGAAAATAGAAAAAAGATTTTTAG
AAGATTATGATCCAGATGAGGTTAAAAGATTTAATTGGCGTAGAGTGTTAATGTTAGTCGTATTTTTAGGAGCATTCCCA
GTTATGATTTGGGGAGTAGTCACTGGAAAATTTTGGTTCGCTGAAATGTCAGGTCTCTTTTTAGTAGTGGCTTTTTTAAC
AGCATTTTTATCAGGTTTTTCCGAGAAAAAAGCTGTAAATACATTTGTAGAAGGAGCTGCAGACTTAATCGGAGTTGCTC
TCATTATTGGAGTTGCTAGATCTATCAATATAGTAATGGATAATGGAATGATTTCCGATACCTTACTTTTTTATACTTCA
TCAATAGTAGAGGGGATGAGTGGAGGTTTATTCGCAAGTGTACAAATGGTACTATTTAGTTTCTTAGGTTTCTTTGTACC
TTCATCTTCAGGTCTAGCTGTACTTTCAATGCCTATTATGGCACCATTAGCAGATACTGTAAATATTTCTAGAGATATAG
TAGTAACTGCTTATAACTGGGGTCAAGGTTGGATGTCCTTTATTACTCCAACAGGTTTAGTATTAGCAACCTTAGAAATG
GTAGGAGTAACTTATGATAAATGGTTAAAGTTTGTTTTACCTTTAATGGGCATAATCGGTGTTTTTTCTATAATTATGTT
AGTGATTCAAACAATGGTCTAA

Protein sequence :
MSDNKKNTAEKQTKKKFSFPTAFTVLFIILVIAAGLTYIVPAGLYSNLEYVPGNDSFLVKSSTGGSEMIPATQEKLDELN
VKIDLRKFRDGSIKKPIAIPGTYQKIKQSPQGPLDIIMAPIEGVMDTVDIMVFVLILGGIIGIINKSGAFDAGIAFLSKK
TEGKEFVLVILVSGLIAVGGTTFGLAEETIALYPILMPIFLANGYDAIVAIAAIYLGSSVGTMFSTVNPFSVVIASDAAG
IAFTEGIVFRLVSLILAMIITLLYIYWYSKKIKKDPQNSLVYEDYEKIEKRFLEDYDPDEVKRFNWRRVLMLVVFLGAFP
VMIWGVVTGKFWFAEMSGLFLVVAFLTAFLSGFSEKKAVNTFVEGAADLIGVALIIGVARSINIVMDNGMISDTLLFYTS
SIVEGMSGGLFASVQMVLFSFLGFFVPSSSGLAVLSMPIMAPLADTVNISRDIVVTAYNWGQGWMSFITPTGLVLATLEM
VGVTYDKWLKFVLPLMGIIGVFSIIMLVIQTMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL1183 YP_186046.1 hypothetical protein Not tested vSa¥ã Protein 1e-107 48
SAUSA300_1064 YP_493762.1 TRAP family protein Not tested vSa¥ã Protein 1e-107 48
MW1052 NP_645869.1 hypothetical protein Not tested vSa¥ã Protein 8e-108 48
SAKOR_01092 YP_008491280.1 Arginine/ornithine antiporter Not tested vSa¥ã Protein 3e-108 48
SAV1171 NP_371695.1 hypothetical protein Not tested vSa¥ã Protein 4e-107 47
SA1014 NP_374287.1 hypothetical protein Not tested vSa¥ã Protein 4e-107 47