Gene Information

Name : Hprae_1260 (Hprae_1260)
Accession : YP_005836557.1
Strain : Halanaerobium praevalens DSM 2228
Genome accession: NC_017455
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1399661 - 1400041 bp
Length : 381 bp
Strand : -
Note : COGs: COG0640 transcriptional regulator protein; InterPro IPR018334:IPR001845; KEGG: hor:Hore_22370 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein,

DNA sequence : 
ATGATAGCAGAGCTTAAAAAGAATTCAATTTGTGATATTTGTGAGGTTTTTAATCCAGATAATCAAGTTGTAAAAATGAT
GAAAGAAAAGACTTTAAGTGATCAAGTAGTTTATGATTTAGCAGAATTATTTAAAACAATGGGTGATCCAACAAGAATTA
AAATTCTTTATGCTTTAAAAGAAAGAGAACTTTGTGTTTGTGATCTTTCAGAGCTTTTAGATATGAGTTCTTCCGCTATT
TCACATCAACTTAGAGTTTTAAGAAATAACAAATTAGTAAAATATAGAAAAGAAGGGAGGTCAGTTTATTATTCTTTAGA
TGATGACCATATAATGTGTCTTTTTGGTCAAGGATTAGAACATGTACTTGAAGATCGTTAA

Protein sequence : 
MIAELKKNSICDICEVFNPDNQVVKMMKEKTLSDQVVYDLAELFKTMGDPTRIKILYALKERELCVCDLSELLDMSSSAI
SHQLRVLRNNKLVKYRKEGRSVYYSLDDDHIMCLFGQGLEHVLEDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 5e-19 44
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 5e-19 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hprae_1260 YP_005836557.1 ArsR family transcriptional regulator BAC0366 Protein 2e-17 48
Hprae_1260 YP_005836557.1 ArsR family transcriptional regulator BAC0456 Protein 2e-21 45
Hprae_1260 YP_005836557.1 ArsR family transcriptional regulator BAC0281 Protein 5e-12 41