|
Name : clpB (KN400_0634) Accession : YP_006889673.1 Strain : Geobacter sulfurreducens KN400 Genome accession: NC_017454 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 672178 - 674775 bp Length : 2598 bp Strand : + Note : - DNA sequence : ATGATCAGACCTGAGAAAATGACCATAAAGACCCAGGAAGCCTTGGCCGGAGCCCAGCAACTGGCCGCACGGCAGGGTAA TGGCTCCATCGAGCCGGAGCACCTTCTGGTCTCGCTCCTTGAGCAGGAAGGGGGGCTCATTGCCCCGATCATTCAGAAAG TGGGAGGTGCACCGGCCGCACTGCGGAGCGCTGCGGATGTGTTGGTGAAAAGGCTTCCCCAGGTGAGCGGGGCCACGGCC CAGGCCTATCTGTCGCCGGCCCTCAACCGGATTCTCGACGCGGCCCAGCGCGAAGCCGATACCATGAAGGATGAATTCGT CTCCACCGAGCATCTCCTCCTCGGCTTCTTTGCCGACCGGCAGTGCGCGGCAGCCCGGGCGCTTCTTGATGCAGGAGTCA GCCGGGATAACGTCCTGGCGGCCCTGATGGAGATCCGCGGGGGAGAGCGGGTTACCGACCAGAACCCCGAGGATACTTAT CAGGCCTTGGCCAAGTATGCCCGCGACCTGACCGATTTGGCCCGTCAGGGAAAGCTCGACCCGGTTATCGGCCGCGACGA CGAGATCCGGCGGGTGCTCCAGGTGCTGTCCCGGCGAACAAAGAACAACCCGGTCCTGATCGGTGAGCCTGGGGTGGGAA AGACCGCCATCGTGGAGGGGCTTGCGCAGCGGATCGTCTCCGGTGATGTGCCTGAGACCCTCAAGGATAAGCGGCTCGTT GCTCTCGATATGGGTGCGCTCATTGCCGGTGCCAAGTACCGCGGTGAATTCGAGGAGCGCCTCAAGGCGGTCATCAGGGA GGTGGCCAAGTCTGAGGGCAAGGTGATCCTGTTCATCGACGAGCTTCACACCTTGGTCGGGGCCGGTGCTGCCGAGGGGG CCATGGATGCGTCCAACATGCTCAAACCGGCGCTTGCCCGGGGAGAGCTCCACTGCATCGGTGCCACGACGCTCAATGAA TATCGCAAGTACATCGAGAAGGACGCGGCTCTTGAACGGCGGTTCCAGCAGGTCTATACCGGCGAACCGTCGGTTGAGGA CACTATCGCGATCCTGCGCGGGCTCAAGGAAAAGTACGAGAACTATCACGGCATAAGGATCAAGGACAGCGCCATCATTG CGGCCGCCACCCTGTCGGACCGCTACATCACCGACCGCTTTCTCCCCGATAAGGCAATCGACCTGATCGATGAGGCCGCC TCACGTTTGAGGATCGAGATCGATTCCATGCCTACGGAAATCGATGAGGTTGAGCGGAGGATCATTCAACTGGAGATCGA AAAACAGGCCTTGCTGCGGGAGAGCCAAGATCCTCACTCTCTGGAGCGGCTGAAAAAACTCGCCGACGAACTGGAGGAAC TCAAGGCTAAGTCGGCCGAGCTCAAGGGGCACTGGCAGCGGGAGAAGGATATCATCGGCCGGGTAAGTTCGCTCAGGCAA CGGCTCGAAGAGAAGAGGGAAGAAGCGAAAAAGGCCGAGCGCGAAGGCAATCTGGCCCGGACGGCTGAGATCCGCTACGG TGAGATCCCGGCTATCGAGAAAGAAATCGCCGACAGGAGCGCGGAGCTGGAGGATATCCGCAAGGAAGGAAAGATGCTGC CGGAGGAAGTGGATGGCGAGCTGGTGGCCGAGATCGTTTCCCGGTGGACCGGTATTCCGGTTTCCCGCATGATGGAGGGC GAGGCGGACAAGCTGGTGCATATGGAGGACCGGCTGATAACCCGGGTCGTCGGCCAGGATGAGGCACTCGTCCTGGTGGC AAACGCCATCCGCCGGGCCCGGTCCGGTCTCTCGGACCCCAATCGCCCTATTGGCTCGTTCCTGTTTCTGGGGCCCACCG GTGTCGGCAAAACCGAAACCGCCAAGGCCCTGGCGGAGTTCCTGTTCAACGACGACCAGGCCATCGTTCGCATCGACATG AGCGAGTATCAGGAAAAGCACACCGTTGCCCGACTCATCGGCGCTCCGCCGGGCTATGTGGGATACGAAGAAGGGGGGCA GCTTACCGAGGCGGTCAGGCGGCGACCCTATTCCATCGTCCTCTTCGACGAGATCGAAAAGGCTCATCCGGAGGTCTTCA ATGTGCTCCTCCAGGTGCTGGACGACGGGCGGCTCACCGATGGGCAGGGGCGTACTGTCGATTTCCGCAACACGGTCATC ATCATGACGAGCAACCTTGGTTCCCAATGGATTCAGCAGTACGGTTCCAGCGACTACGCACGCATGAAGGCCATGGTCAC CGAGACGCTCAAGGAGGGATTCAAACCAGAATTCCTCAACCGCATCGACGAAATCGTGATCTATCATGCGCTTCCCCTTG AGCAGATCAAGAAGATCGTCGATATCCAGGTGGAATGTCTGAAGCAGCGACTCGCTGATCGGCGCATCGTCCTTGAACTG AGCGACAAGGCCCGGGAATACCTGAGCCGCGAGGGCTATGACCCCGCCTACGGTGCCCGGCCCCTCAAGCGGACGATCCA GCGAAAGATCCAAGACCCGCTGGCCCTGGCGCTTCTGGAAGGAAAGTTTCAGGAAGGGGATACGGTCAGGGTCGACCTGT CCGTGTCGGGGGAGGAGCTTGTCATCACGAAGAAATAG Protein sequence : MIRPEKMTIKTQEALAGAQQLAARQGNGSIEPEHLLVSLLEQEGGLIAPIIQKVGGAPAALRSAADVLVKRLPQVSGATA QAYLSPALNRILDAAQREADTMKDEFVSTEHLLLGFFADRQCAAARALLDAGVSRDNVLAALMEIRGGERVTDQNPEDTY QALAKYARDLTDLARQGKLDPVIGRDDEIRRVLQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSGDVPETLKDKRLV ALDMGALIAGAKYRGEFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGELHCIGATTLNE YRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKYENYHGIRIKDSAIIAAATLSDRYITDRFLPDKAIDLIDEAA SRLRIEIDSMPTEIDEVERRIIQLEIEKQALLRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVSSLRQ RLEEKREEAKKAEREGNLARTAEIRYGEIPAIEKEIADRSAELEDIRKEGKMLPEEVDGELVAEIVSRWTGIPVSRMMEG EADKLVHMEDRLITRVVGQDEALVLVANAIRRARSGLSDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDM SEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVI IMTSNLGSQWIQQYGSSDYARMKAMVTETLKEGFKPEFLNRIDEIVIYHALPLEQIKKIVDIQVECLKQRLADRRIVLEL SDKAREYLSREGYDPAYGARPLKRTIQRKIQDPLALALLEGKFQEGDTVRVDLSVSGEELVITKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-107 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006889673.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 3e-118 | 45 |
| clpB | YP_006889673.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 2e-112 | 41 |
