Gene Information

Name : KN400_0440 (KN400_0440)
Accession : YP_006889485.1
Strain : Geobacter sulfurreducens KN400
Genome accession: NC_017454
Putative virulence/resistance : Unknown
Product : integrase, bacteriophage P4-type
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 466412 - 467656 bp
Length : 1245 bp
Strand : +
Note : -

DNA sequence :
ATGCCAAAGAAGATTATTCCGCTATCCGCCCTGAAAATCGACAAGGCAAAACCCCAGGAGAAGGAAGTTAAACTTTACGA
CGGTGGGGGCCTTTTCTTGCTGATTACCCCCTCCGGCGGCAAGCTCTGGCACCTCAAATACAGGTATGGCGGCAAGGAAA
AGAAGTTGGCGTTGGGGGCCTACCCTCTTGTCTCGCTCGAAGGCGCCAGGCAGCGCCGCGAAGATGCCAAGAAGTTGTTG
GCAAATGGCGTGGACCCTGGAGAGATGAAAAAGGTTCTCAAGTCCGCTGCCAAGGATAAGGCCGCAAATACGTTTGAGGT
AGTGGCCAGGGAATGGCACCATAAATTTTCGTCAGCCGGGAAATGGTCTCCGACCCATGCGGCCGATATCCTCCACCGCC
TCGAAAAAGACATCTTCCCTCCCCTGGGCGCACGCCCCATTTCCGAGATCAAGCCGCTGGATCTGCTCAGGGTACTGGAA
AGAATAGCCAGTCGCGGCGCACTCGATACGGCTCATCGCCTGCGGCACCATTGCGGAATGATCTTTCGCTATGCCGTAGT
GACAGAGCGAGCCGAGCGCGATGTTGCCGCAGACTTGAGGGGAGCGTTGCCCCCTGTCAAGAATGGACACCATGCCGCTC
CGACAACACCCCAAAGCCTTCTCCCGCTTCTCAGGGCAATAGATGTCTACGAAGGCAGCTACATCGTCAAGTGCGCCCTC
CAGCTCCTTCCCTTGTTTTTCTGCAGGCCTGGGGAACTGAGGGCCGCCGAATGGACAGAGTTTGATTTCGACAAAGCAAT
CTGGGAGATCCCCGCGACCCGGATGAAGATGAAACAGCCCCATATTGTCCCCCTGTCCAAACAGGCTATTGCCATTCTGG
AATCGCTGCAATCCCTCACCGGCTCTGGCAAATATCTCTTTCCCTGCCAGCGTTCAACGCAAAGATGCATGAGCGACAAC
GCCTATAACGCGGCCTTGCGCCGCATGGGATTTACCAAGGATGAAGCGACTGCCCATGGGTTCAGGGCCTCAGCTCGAAC
GATTCTTGACGAGGTGCTGCGCATACCGGTTGTTCTGATTGAGCATCAACTCAGTCACTCCGTTCGTGACCCGCTTGGAA
GGGCCTACAACCGAACCTCTCATCTCGACGAGCGCAAGAAGATGATGCAGCAGTGGGCGGACTACCTGGACGGGCTGAAG
TGCGGGGCGAAGGTGATACCTTTGCGGGATCAAAGGTCTGCCTGA

Protein sequence :
MPKKIIPLSALKIDKAKPQEKEVKLYDGGGLFLLITPSGGKLWHLKYRYGGKEKKLALGAYPLVSLEGARQRREDAKKLL
ANGVDPGEMKKVLKSAAKDKAANTFEVVAREWHHKFSSAGKWSPTHAADILHRLEKDIFPPLGARPISEIKPLDLLRVLE
RIASRGALDTAHRLRHHCGMIFRYAVVTERAERDVAADLRGALPPVKNGHHAAPTTPQSLLPLLRAIDVYEGSYIVKCAL
QLLPLFFCRPGELRAAEWTEFDFDKAIWEIPATRMKMKQPHIVPLSKQAIAILESLQSLTGSGKYLFPCQRSTQRCMSDN
AYNAALRRMGFTKDEATAHGFRASARTILDEVLRIPVVLIEHQLSHSVRDPLGRAYNRTSHLDERKKMMQQWADYLDGLK
CGAKVIPLRDQRSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 4e-79 46
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 5e-74 45
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 5e-74 45
int AAD44730.1 Int Not tested SHI-2 Protein 8e-78 44
int CAC39282.1 integrase Not tested LPA Protein 2e-78 44
aec33 AAW51716.1 Int Not tested AGI-3 Protein 1e-78 44
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-77 44
int ACU09430.1 integrase Not tested LEE Protein 2e-77 44
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-77 44
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-77 44
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 3e-78 43
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 2e-76 43
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 2e-76 43
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 2e-76 43
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 3e-69 42
int NP_807963.1 bacteriophage integrase Not tested SPI-7 Protein 4e-61 41
int NP_458759.1 bacteriophage integrase Not tested SPI-7 Protein 4e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KN400_0440 YP_006889485.1 integrase, bacteriophage P4-type VFG0783 Protein 1e-77 44
KN400_0440 YP_006889485.1 integrase, bacteriophage P4-type VFG0598 Protein 9e-77 43