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Name : tssH (KN400_0402) Accession : YP_006889449.1 Strain : Geobacter sulfurreducens KN400 Genome accession: NC_017454 Putative virulence/resistance : Virulence Product : type VI secretion system ATPase TssH, putative chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 428063 - 430690 bp Length : 2628 bp Strand : + Note : - DNA sequence : GTGCTGACCGTCGACCTTACCGCTCTTCTCAAGCGACTCAACCCCCTCTGCACCCGGGTACTGGAGGGGGCCGCAGGACT CTGCGTGGCCAGAGGGCACTACGAAGTGACTGTTGAACACTTCCTGGCCAGGTTGCTCGATGAGGCGGGGGGGGACCTTG TTGCCGTTCTGCGGAACTCTAACATCGACGCCTCCCCGCTGAAGATCGGAGTCGTCCGGGTTCTCGACGAGTTGCCCACC GGCAACGGGGGGCGGCCGGTCTTCTCCCCGATCCTCCTGGAGTGGCTCCAGGCGGGGTGGCTCACGGCCTCCCTCGATCT GAACGAGGAGCGGGTCCGCTCCGGAGCGCTCTTCGCGGCGCTCTTGGCCCGGCCGCTGCGGTTCGCGGCGGGCCGCTACG TGGACCAGCTCATGCCCGTGGGACGGGAGGGGCTTCTCTCCGGCTTTTCGCGCGCTGTTTCCGGCTCGGAGGAGAACTCC TGCATGGGCGGCGACACCGCTTCCGTCGCCGGGCCCGGCCGGGATGGCACGGCACTTTCCCGCTTCTGCACCGACTTCAC CGCACGAGCGGCCGAGGGGGGCATGGACCCGGTCTTCGGCCGTGATCGGGAGATCGGCCGGATGATCGACATCCTGGCCC GGCGGCGGAAGAACAACCCCATCGTGGTGGGAGAGGCGGGGGTCGGCAAGACCGCCGTGGTGGAGGGGCTGGCACTCCGT ATCGTTGAGGGGGAGGTGCCGGAGGCATTGCGGGAGGTGAGGCTCCTGGGGCTTGATCTCGGCCTGCTCCAGGCGGGGGC AGGGGTGAAAGGGGAGTTCGAGAGCCGTCTGAAGAGCGTTATCGAAGAGGTAAAGGGGGCTTCCCGGCCGGTGATTCTCT TTATCGATGAGGCCCACACCCTGATCGGTGCCGGCAACCAGGCGGGCGGGGGTGATGCCGCCAACCTTCTGAAGCCGGCC CTGGCCCGGGGTGAGCTGCGCACCATAGCCGCCACCACCTGGAGCGAATACAAGAAATATTTCGAGAAGGATGCCGCCTT GGCCAGGCGCTTCCAGCCGGTGAAGCTGGACGAACCGTCGGTGGAGACGGCGGTGCTGATCCTGCGGGGCCTCAAGGATA CGTACGAGGCGGCCCATGGGGTCACCATCCGGGATGACGCAGTCCGGGCGGCGGCGGAGCTCTCGTCCCGCTACCTGTCG GGCCGGCAGCTGCCGGACAAGGCGGTGGATCTCCTTGATACGGCTGCGGCCCGGGTGAAGCTCCTGCTCACCGGCAAGCC GGGAAGGGTAGAGGAGGCGGAGCGGCGCATCCAGGCCCTGGAGCGGGAAGAGGCCGCCCTCCGCCGTGATCGGCTCCAGG GGCGGCCGGAGGACGAAGGACGGCTGGCGGTGCTGAAGGAGGAGCTGGCGCTGTTGCGGGAGGAGCTGGCTGCCGTAACG GCTCGCTGGCACCGGGAACGAGAGCTGGCCGGGGCGGTGGTGGCCCTGCGGAACGAGGCAGCGGAGGGCCGTGACGCAGG TGGGGACGCAGTGGGGCTGAAGATGGCGGAACCCGCGGCAAAGCTGGCGGAAGTCCAGGGGGATGAGCCGCTGGTCAGGA TCGAGGTGGACCCGGAGGTGGTTGCGCAGGTGGTGGCCGACTGGACCGGCATTCCCCTAGGGCGCCTCCGCAAGGACCGG ACCGCCGGGGTGCTTGCCCTGGAAGAGGGCCTGCGCCGGCGCATCCGGGGGCAGGAACCGGCGCTGGCCGCCGTGGCCGA GGTGCTCCGTTCCTCGGCTGCTGGCCTCAAGGACCCGCGCCAGCCTCTGGGGGTCTTCCTGCTTGTCGGCCCCTCCGGCG TCGGCAAGACCGAAACCGCCGTGGCCGTGGCCGATCTTCTTTTCGGCGGCGAACGGTTCCTCACCGTCATCAACATGAGC GAATTTCAGGAGCGCCACACCACCAGCCGTCTCATCGGCTCGCCGCCGGGGTACGTGGGGTATGGTGAGGGCGGCGTCCT TACCGAGGCGGTCCGCCGCAGCCCCTACTCGGCGGTGCTGCTGGACGAGGTGGAAAAAGCCCACCCCGACGTCCTCAATC TCTTTTACCAGGTGTTCGACAAGGGGATGCTGGCCGACGGGGAGGGGCGGGTGATCGACTTCGCCAACACGGTCATCTTT CTGACGAGCAATCTGGCGGCGGATGTCGTCGTCTCGCGCTGCGCGGAAGAGCCGCAGCCCACGACAGAGGAGCTGGCCGC CGCCATCCGCCCCCATCTCGCGCGGCACTTCAAACCGGCGCTCCTGGCCCGCATGACCGTGGTCCCCTACCTGACCCTGG CGCCGGACAGCCTGGAGGAGATCGTGGGCCTCAAGCTCGGCCGGGTGGCGGAGCGGCTCCGGGAGAACAGCCGAACGGAG CTTGCGTGGACCCCGGCGGTTGCGGCCCGGCTCGCTGCCCGTTGCTCCGAAGTGGAGAGCGGCGCCAGGGCCATCGACCA TATCCTGCGCGGAACCCTCCTGCCGCTCCTCTCCCGGGAGATCCTGGCGCGGATCGGCGGAGGAGAGGAGCTGGAGGCAA TCCGGCTCGATGTAGCAGCCGACGGTTCCTTTACCGTCGGCTGTGGGGACGGTGCGGCGGTCCGGTGA Protein sequence : MLTVDLTALLKRLNPLCTRVLEGAAGLCVARGHYEVTVEHFLARLLDEAGGDLVAVLRNSNIDASPLKIGVVRVLDELPT GNGGRPVFSPILLEWLQAGWLTASLDLNEERVRSGALFAALLARPLRFAAGRYVDQLMPVGREGLLSGFSRAVSGSEENS CMGGDTASVAGPGRDGTALSRFCTDFTARAAEGGMDPVFGRDREIGRMIDILARRRKNNPIVVGEAGVGKTAVVEGLALR IVEGEVPEALREVRLLGLDLGLLQAGAGVKGEFESRLKSVIEEVKGASRPVILFIDEAHTLIGAGNQAGGGDAANLLKPA LARGELRTIAATTWSEYKKYFEKDAALARRFQPVKLDEPSVETAVLILRGLKDTYEAAHGVTIRDDAVRAAAELSSRYLS GRQLPDKAVDLLDTAAARVKLLLTGKPGRVEEAERRIQALEREEAALRRDRLQGRPEDEGRLAVLKEELALLREELAAVT ARWHRERELAGAVVALRNEAAEGRDAGGDAVGLKMAEPAAKLAEVQGDEPLVRIEVDPEVVAQVVADWTGIPLGRLRKDR TAGVLALEEGLRRRIRGQEPALAAVAEVLRSSAAGLKDPRQPLGVFLLVGPSGVGKTETAVAVADLLFGGERFLTVINMS EFQERHTTSRLIGSPPGYVGYGEGGVLTEAVRRSPYSAVLLDEVEKAHPDVLNLFYQVFDKGMLADGEGRVIDFANTVIF LTSNLAADVVVSRCAEEPQPTTEELAAAIRPHLARHFKPALLARMTVVPYLTLAPDSLEEIVGLKLGRVAERLRENSRTE LAWTPAVAARLAARCSEVESGARAIDHILRGTLLPLLSREILARIGGGEELEAIRLDVAADGSFTVGCGDGAAVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-130 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssH | YP_006889449.1 | type VI secretion system ATPase TssH, putative chaperone | VFG2084 | Protein | 2e-157 | 49 |
