Gene Information

Name : fliI (KN400_0381)
Accession : YP_006889428.1
Strain : Geobacter sulfurreducens KN400
Genome accession: NC_017454
Putative virulence/resistance : Virulence
Product : flagellum-specific ATPase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 409992 - 411317 bp
Length : 1326 bp
Strand : +
Note : -

DNA sequence :
ATGTCTAGAATCGATCTTTCCCGCTATCTCTCCGCCGTGGATGCCATGAAGCCGATCCGGTTCCACGGCAAGGTGACCCA
GGTAGTGGGGCTCGTCATTGAGGGATTCTGCCCCGATGCGGCGGTCGGTACACTCTGTCTCGTCCACCCCAATGACGGTG
ATCCCATCCCGGCCGAGGTGGTCGGCTTCCGCGACAACAAGACGCTGCTGATGCCGCTTGGGGAGCTGCGCGGGGTGGGG
CTCGGCAGCCTTATCTCGGTGAAGCGGAAAAAGGCTTCGCTCGGCGTGGGGCCGGGGCTGCTGGGACGTGTTATCGACGG
ACTCGGAGTGCCCATAGACGATAAGGGTCCCCTGGCCATCCGCGAAGAGTACCCTATCTACGCCAATCCGGTGAACCCCA
TGAAGCGGCGGCCGATCCGCCAGCCTCTGGATCTGGGCATCCGGGCGATCAATGCGCTGCTCACCTGCGGCGAGGGGCAG
CGTGTCGGAATCATGGCCGGGTCCGGTGTCGGAAAGTCGACACTGCTGGGAATGATCGCCCGCTATACCGAGGCGGACGT
GAACGTCATCGCCCTCATTGGTGAGCGGGGGCGCGAACTGCGTGAATTCATCGAGAAGGACCTCCAGGAGGAGGGACTCA
AGAAGTCAGTGGTCGTGGTGGCCACCTCCGATCAGCCTCCGCTGGTCCGGATGCGGGGCGCCTACATCGCCACCACCATT
GCTGAGTATTTCCAGGCCCAGGGGAAGAAGGTGCTGCTGATGATGGACTCGGCCACCCGCTTTGCCATGGCCATGCGTGA
GGTAGGGCTTGCCATCGGCGAGCCGCCCACCACCAAGGGATACACGCCGTCGGTCTTTGCGGCGCTGCCCAAGCTTCTGG
AGCGGACCGGCAGCTTTCTGGACGGAAGCATCACCGGCCTCTACACGGTGCTCGTTGAGGGGGATGACTTCAACGAACCG
ATCTCGGATGCCATGCGGAGCATCCTGGACGGCCACATCGTCCTGAACCGCGAGCTTGCGGCCCGGGCCATCTATCCTCC
CCTGGATATCCTGGCCAGCGCCTCCCGGGTCATGAACGACGTGACCGAGCGAAGCCAGCAGCAGTTCGCCTCCCGGTTCA
AGGAGCTGCTCGCCGCCTACCGCCAGGCCGAGGACCTGATCAATATCGGTGCCTACAAGCCGGGATCGAACCCGACCATC
GACTATGCCATCGCCAAGATGGACGGCATGGTCAATTTCATCCGCCAGGGAATCCACGACGGGGTTTCCATGGAGCAGTC
GATAGCGGAGCTTGCCGATATCTTTGATGAGGGGATGGCACTCTGA

Protein sequence :
MSRIDLSRYLSAVDAMKPIRFHGKVTQVVGLVIEGFCPDAAVGTLCLVHPNDGDPIPAEVVGFRDNKTLLMPLGELRGVG
LGSLISVKRKKASLGVGPGLLGRVIDGLGVPIDDKGPLAIREEYPIYANPVNPMKRRPIRQPLDLGIRAINALLTCGEGQ
RVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTI
AEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGSFLDGSITGLYTVLVEGDDFNEP
ISDAMRSILDGHIVLNRELAARAIYPPLDILASASRVMNDVTERSQQQFASRFKELLAAYRQAEDLINIGAYKPGSNPTI
DYAIAKMDGMVNFIRQGIHDGVSMEQSIAELADIFDEGMAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-104 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-91 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-91 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-91 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-92 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-92 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-91 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-91 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-90 48
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-90 48
escN AAC38383.1 EscN Virulence LEE Protein 1e-83 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 6e-85 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-84 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-84 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-85 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-85 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-85 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-85 48
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-82 48
escN CAC81862.1 EscN protein Virulence LEE II Protein 4e-84 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-83 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-83 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 8e-84 47
escN AAC31513.1 L0034 Virulence LEE Protein 1e-83 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 5e-84 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-83 47
escN CAI43874.1 EscN protein Virulence LEE Protein 6e-84 47
escN AAK26715.1 EscN Virulence LEE Protein 4e-84 47
escN AAL57542.1 EscN Virulence LEE Protein 4e-84 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-83 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 7e-72 47
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 7e-76 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-82 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-78 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-78 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-81 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-84 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 5e-81 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-81 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 9e-78 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 9e-78 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-73 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-73 44
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 9e-69 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-69 41
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 4e-70 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG2144 Protein 5e-105 53
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG0390 Protein 6e-104 53
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG0192 Protein 2e-107 52
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG0048 Protein 4e-105 51
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG1254 Protein 2e-96 51
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG2499 Protein 1e-91 50
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG0730 Protein 8e-84 48
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG0515 Protein 3e-85 48
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG2331 Protein 2e-85 47
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG0812 Protein 5e-84 47
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG1008 Protein 7e-70 42
fliI YP_006889428.1 flagellum-specific ATPase FliI VFG1778 Protein 1e-66 41