Gene Information

Name : kdsB (KN400_1922)
Accession : YP_006890888.1
Strain : Geobacter sulfurreducens KN400
Genome accession: NC_017454
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2045262 - 2046014 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGAACATCACCGCCATAATCCCCGCCCGTTTCGCGTCGACCCGCTTTCCCGGCAAGGCTCTGGCCGACATTGCGGGCAA
GCCGATGGTTCAGCATGTGTATGAGCGTACCGCCCGGGCACGTCTTGTGTCTGAGGTTGTCGTGGCAACGGATGATGACC
GGATCGCCCAGGCGGTCCGCGGCTTCGGCGGCAGGGTCGAAATGACCTCCCGGGACCACGAGACGGGAACGGATCGTCTC
GCCGAGGTGGCCTCGCGCATCGGGGCCGAGATCATCGTGAACGTGCAGGGTGATGAACCGCTCATTGAGCCCGCCATGAT
CGACGAGGCGATTGCTCCGCTTGCGGAGAATCCTGCCGTTCGCATGGGTACCCTCAAGAGCCGCATCCGGACGCTCCACG
ACTTTCTGAGTCCCAACGTCGTGAAGGTTGTGACTGATCTGGAGGGGTATGCGCTCTACTTCTCCCGTTCGCCGCTTCCT
TTTTTCAGGGACAAGTGGAATGACTTGAAAGACGAGTCCTTTGCATCGGGGCGGCTGCTCTGCTACAAGCATGTGGGGCT
CTATGTCTATCGACGCGATTTCCTTATGGAGTTCGCAAAAATGCCACCCACCGCCCTCGAGTTGGCGGAAAAACTCGAAC
AGCTCCGGGCGCTGGAGAACGGCTGCCGGATCAGGGTGGTTGAAACAGCGCACGAGTCGATCGGCGTCGACACCCCCAAC
GACCTGGAAAAGGTTCTCGAAAAGTTGAAATAA

Protein sequence :
MNITAIIPARFASTRFPGKALADIAGKPMVQHVYERTARARLVSEVVVATDDDRIAQAVRGFGGRVEMTSRDHETGTDRL
AEVASRIGAEIIVNVQGDEPLIEPAMIDEAIAPLAENPAVRMGTLKSRIRTLHDFLSPNVVKVVTDLEGYALYFSRSPLP
FFRDKWNDLKDESFASGRLLCYKHVGLYVYRRDFLMEFAKMPPTALELAEKLEQLRALENGCRIRVVETAHESIGVDTPN
DLEKVLEKLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 8e-46 48
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-45 48
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-46 48