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Name : pilB (KN400_1518) Accession : YP_006890479.1 Strain : Geobacter sulfurreducens KN400 Genome accession: NC_017454 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 1604494 - 1606200 bp Length : 1707 bp Strand : + Note : - DNA sequence : ATGCAGGCTAGCAGACTGGGAGAACTCCTGGTTCGAAACAATATCATCACCAAGGAACAGCTTGCCAAGGCACTGGACGA GCAACGAACCTCCGGCGGCCAACAGCGCCTTGGCTCCATCCTCGTCAAGAACGGCCTTGTCACTGAGCCCGATCTCACCA CGTTCCTCTCCAAGCAGTACGGTGTCCCCTCCATCAATCTGAGTGAATTCGAAGCCGATATGGCGGTGGTCAAGATCATC CCCGCCGACGTGGCCCAGAAGTACCAGATCGTCCCGGTGAACAGGGCCGGTTCGACCCTGATCATTGCCATGGCTGACCC GTCGAACATCTTCGCCATCGACGACATCAAGTTCATGACCGGCTACAACGTGGAGGTGGTCGTCGCTTCCGAGTCGTCCA TCAAGACTGCCATCGACAAGTACTATGACCAGTCAGCGTCTCTGGCCGACGTCATGAACGACCTGGAGATGGACGATCTG GAGGTTATCGGCGAGGACGAGGATGTAGACGTTTCTTCCCTCGAACGGGCGACCGAGGATGCGCCGGTCGTCAAGCTCGT GAACCTGATCCTCACCGACGCCATCAAGAAGAAGGCGAGTGATATCCATATCGAGCCCTATGAGCGGACCTTCCGGGTGC GCTATCGGATCGACGGCGTCCTCTACGAAGTCATGAAGCCCCCCCTGAAACTGAAAAACGCCATCACGTCGCGGATCAAG ATCATGGCTGACCTGGATATTGCCGAACGGCGGCTTCCCCAGGACGGCCGCATCAAGATCAAAATGGGTGGCGGGCAGGA CATGGACTACCGGGTGTCGGTCCTGCCGACCCTGTTCGGCGAGAAGGTGGTTCTGCGACTCCTGGACAAGTCGAACCTCC AGCTCGACATGACCAAGCTGGGCTACGAGCCCACGGCGTTGAGCTACTTCAAGGAGGCGATTCACAAGCCCTTCGGCATG GTGCTGGTGACCGGACCCACGGGGAGCGGCAAGACGGTTTCCCTCTATTCGGCGCTTTCCGAGCTCAACAAGACTACCGA GAACATCTCCACGGCCGAAGACCCGGTGGAGTTCAACTTCGCCGGCATCAACCAGGTGCAGATGCACGAAGATATCGGTC TTACCTTTGCCGCCGCGCTCCGCTCCTTCCTGCGTCAGGACCCGGACATCATCATGATCGGAGAGATCCGGGACTTCGAG ACGGCCGAGATCGCCATCAAGGCTGCGCTTACCGGTCACTTGGTTCTCTCTACCCTTCACACCAACGATGCCCCGGCCAC CATCAACCGGCTGTTGAACATGGGGGTCGAGCCGTTTCTTGTTGCCTCGGCGGTGAACCTGATTACCGCCCAGCGTCTTG CCCGGCGGGTCTGCTCCGAGTGCAAGGCCGTGGAGGAGATACCGATCCAGGCTTTGATCGATGCAGGCGTCCCTCCCGAG GAAGCTCCTGAATATGTCTGCTTTCGCGGCACCGGTTGTGCCAAGTGCAACAACACCGGCTACAAGGGGCGCGTCGGCTT CTATCAGGTAATGCCCATGCTGGAGGAAATTAGGGAGCTGATTCTCAACGGCGCCAATACGGCCGAAATCAAACGCGAAT CCATGCGCCTGGGCATCAAGACCATGCGCCAATCGGGCCTGACCAAACTCAAGGAGGGGGTTACCTCCTTTGAGGAGGTG CTACGGGTTACCGTGGCTGACGACTAA Protein sequence : MQASRLGELLVRNNIITKEQLAKALDEQRTSGGQQRLGSILVKNGLVTEPDLTTFLSKQYGVPSINLSEFEADMAVVKII PADVAQKYQIVPVNRAGSTLIIAMADPSNIFAIDDIKFMTGYNVEVVVASESSIKTAIDKYYDQSASLADVMNDLEMDDL EVIGEDEDVDVSSLERATEDAPVVKLVNLILTDAIKKKASDIHIEPYERTFRVRYRIDGVLYEVMKPPLKLKNAITSRIK IMADLDIAERRLPQDGRIKIKMGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPTALSYFKEAIHKPFGM VLVTGPTGSGKTVSLYSALSELNKTTENISTAEDPVEFNFAGINQVQMHEDIGLTFAAALRSFLRQDPDIIMIGEIRDFE TAEIAIKAALTGHLVLSTLHTNDAPATINRLLNMGVEPFLVASAVNLITAQRLARRVCSECKAVEEIPIQALIDAGVPPE EAPEYVCFRGTGCAKCNNTGYKGRVGFYQVMPMLEEIRELILNGANTAEIKRESMRLGIKTMRQSGLTKLKEGVTSFEEV LRVTVADD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-89 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-89 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_006890479.1 | type IV pilus biogenesis ATPase PilB | VFG1880 | Protein | 1e-119 | 46 |
| pilB | YP_006890479.1 | type IV pilus biogenesis ATPase PilB | VFG0112 | Protein | 1e-121 | 46 |
| pilB | YP_006890479.1 | type IV pilus biogenesis ATPase PilB | VFG0182 | Protein | 3e-92 | 46 |
| pilB | YP_006890479.1 | type IV pilus biogenesis ATPase PilB | VFG2048 | Protein | 3e-89 | 46 |
| pilB | YP_006890479.1 | type IV pilus biogenesis ATPase PilB | VFG1876 | Protein | 8e-90 | 45 |
| pilB | YP_006890479.1 | type IV pilus biogenesis ATPase PilB | VFG0233 | Protein | 2e-107 | 44 |
