Gene Information

Name : NE061598_08170 (NE061598_08170)
Accession : YP_005831585.1
Strain : Francisella tularensis NE061598
Genome accession: NC_017453
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1446876 - 1447508 bp
Length : 633 bp
Strand : -
Note : COG2148 Sugar transferases involved in lipopolysaccharide synthesis

DNA sequence :
ATGGGTAGTGGTTTTATGTTTTATGAGGTTTTTAAAAGATTGCTTGATATTTTACTTTCTTTTATGGGGTTGTTGTTATT
AAGTCCTATTTTCTTAATTATTATTTTTATGATAAAGAAAGATTCAAAAGGACCTATATTTTTTAAACAAAAGCGCTATG
GTAAAGATAAGCAATTTTTTTACATATATAAGTTTAGAACTATGTATGTTGATACTCCAAAAGATATGCCAACGCACATG
TTACAGGATCCATCGAAATGTATAACTAAGGTTGGAGGATTTTTAAGGAAATCATCTTTAGATGAGTTGCCACAAATTAT
AAATATTCTAAAAGGTGAAATGAGCATCGTGGGTCCAAGACCAGCATTATGGAATCAAGATGACTTAATAGCACAAAGAG
ATAAGTATGGGGCAAATGCTGTGCCTGTGGGACTGACTGGCTGGGCACAGATTAATGGTAGGGATGAATTACCAATACCT
GATAAAGCTAAACTTGATGGTGATTATGTAAAAAATAAAAGTACATGGTTTGATTTAAAATGTATTTTTTTGACAGTATT
TTCTGTTTTTGCCAAAAAGGGCGTCGTTGAGGGTGGTACTGGAGCTTTAGGTAACAAAGAGGATTTAAAGTAG

Protein sequence :
MGSGFMFYEVFKRLLDILLSFMGLLLLSPIFLIIIFMIKKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHM
LQDPSKCITKVGGFLRKSSLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELPIP
DKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGVVEGGTGALGNKEDLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-27 50
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 6e-26 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE061598_08170 YP_005831585.1 glycosyltransferase VFG1369 Protein 5e-39 60
NE061598_08170 YP_005831585.1 glycosyltransferase VFG1309 Protein 6e-28 46