Gene Information

Name : smpB (NE061598_06870)
Accession : YP_005831350.1
Strain : Francisella tularensis NE061598
Genome accession: NC_017453
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1202078 - 1202551 bp
Length : 474 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGAGTAAACATAAGGTTTCTCCAGCGACTATTGCTAAAAATAAAAAAGCCTTGCATGATTATACTATTTTAGAGAAATT
TGAAGCCGGAATAGTTCTACAAGGTTGGGAAGTAAAAAGTATTCGCGCTGGTAAAGTACAAATGGTTGATAGTCATGTGC
ATATTAAACATGGTGAAGCGTGGCTTTTTAATTGTCTAATCACACCTTTGCTATCTGCCTCAACTCATGTGGTTGCAGAT
GCTGCAGCAACACGCAAGCTACTTCTCAATCGTCGTGAGATTAATAAGATTATGGGTAGAATTGAGCAAAAAGGTTTTAC
ATGTATACCTCTTTCTATGTATTGGAAAGGTCCACGAGTAAAAGTAGAAATAGCATTAGCTCAAGGTAAAAAAGTTCATG
ATAAGCGCCAAGCACAAAAAGACAAAGACTGGGCACGCGAAAAAGATAGATTATTTAAAAAGGCTTATAAATAA

Protein sequence :
MSKHKVSPATIAKNKKALHDYTILEKFEAGIVLQGWEVKSIRAGKVQMVDSHVHIKHGEAWLFNCLITPLLSASTHVVAD
AAATRKLLLNRREINKIMGRIEQKGFTCIPLSMYWKGPRVKVEIALAQGKKVHDKRQAQKDKDWAREKDRLFKKAYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-34 52
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-20 44
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-19 44