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Name : hsdR (R2846_0805) Accession : YP_005829269.1 Strain : Haemophilus influenzae R2846 Genome accession: NC_017452 Putative virulence/resistance : Unknown Product : Type I restriction enzyme HindVIIP, R protein Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 848078 - 851245 bp Length : 3168 bp Strand : - Note : - DNA sequence : ATGCTCAACGAAAACGACATAGAACAACTCACTCTTCAGCGCCTGCAATCCCTCGGTTGGGAATATCGCTATGGTAAAGA CTTGCCTGTTCATGAGGGCAAGTTTGCCCGTGGCGATTTGAGCGGCGTAGTCTTTGTTGAGCAACTGCGTGAGGCGGTGC GTAAACTTAATCCTCAGCTGCCTGAAAGTGCGGTTGATTCTGTAGTGAAATCGGCAACGAAAAGCGATATTGGCGACTTG GTTGTGCGTAATCAGACGTTTTATAAACTGCTGCGTGATGGCGTGCGGGTCGAATATACGCAAAACGGCGAACAGAAAAT TGAGATGGTGCGTTTGGTGGATTTCGAGCATTGGGGAAACAACCGTTTTGTCGCCGTCAATCAGCTGGAAATCCGCAGCC GTAAAGGGGGCAAGCGGATTCCCGATATTATCGGCTTTGTAAATGGCTTACCGTTGGTGGTATTTGAGCTCAAAAATCCA CTACGTGAATCGGCGGATTTGTTGCAAGCGTTTAATCAGTTTGAAACCTATAAAGATGAAATTGCCGAGCTGTTTGTTTA CAACCAAGCTCTGATTATTTCAGACGGCATTGTCGCCCGTTTGGGTTCGCTTTCGGCAGATTTCCAACGCTTTACGCCGT GGAAAGTGGTCGATGAAAAAAATAAAAGCGCGCGGTTATATTTTGACGATGAGTTGCAAAGCCTGCTTAATGGCCTGTTG CAGCCTAAGGATTTACTCGACTATATCCGCTATTTCGTCTTGTTTGAACGGGATTCCGTTGGCAAAACCATTAAAAAAAT CGCGGCGTACCATCAATATTACGGCGTAAATGAAGCGGTAGAATCCACGATTTTTGCCACAAGCGAGCAAGGCGATAAAC GCATTGGTGTGATGTGGCATACGCAGGGTTCGGGCAAGTCGATTTCGATGCTGTTTTATGCAGGCAAACTGCTTGCACAG CCTGAATTGAAAAATCCTACCATTGTAGTGGTTACCGACCGCAACGATTTAGACGGTCAGCTCTTCCAAACCTTTTCTTC AGGCAAAGATTTAATCAAGCAAACACCGCAACAAGTGGAAGACCGTGATCAACTGCGCCAACTGCTCGCACAAAATGAAG TCGGCGACGTATTTTTTACCACGATTCAGAAATTCGCCCTAAATGAGGAAGAAAGCCGCTTCCCTATTTTAAATGAGCGC AACAATATTATTGTGATCAGCGATGAGGCTCACCGCAGCCAATATGGCTTTACGCAAAAGCTGCATAACGGCAAGTTTCA GACAGGTTATGCTCGCCATTTGCGTGATGCTTTACCTAATGCCTCGTTTATTGGTTTTACAGGTACGCCAATTAGCCTTG AAGATAAGGACACGCAAGATGTGTTCGGTCGTTATGTGTCCATTTATGACTTGCAAGATGCGGTGGAAGATGGTGCAACT GTGCCGATTGTGTATGAAGCACGCCAAATCAAGCTAGCGGAGAATGCTAATCACGATGAATTATTTGCAGAAATTGATGA ACTGCTGGAAGGCGAAGAAAACCCGAAATTACGCTTGCGAGAAAAATTGTTCGGCTCAGAAGCACGATTGCATGATTTAG CGATCGATTTTGTGCAACATTTTGCAAAACGCAATGAAGTGGTTGACAGCAAAGCGATGATGGTGGTTTCCAGCCGTCAG ATTTGCGTGGACTTATACAATGAAATCATCAAATTGCGCCCTGAATGGCATTCGGACAATATCAACGAAGGGGCGATTAA AATTGTGATGACAGGTTCTGCTTCCGATGCGTCTGAAATGCAGAAACACGTTTACAGTAAGCAGGAAAAACAAACGCTAG AACGCCGCTTTAAAGACCCGAACGATCCGCTGAAGGTGGTGATTGTGCGTGATATGTGGCTGACAGGCTTTGATGCACCG TGCTGTAACACTATGTATCTTGATAAGCCAATGAAGGGGCATAACCTAATGCAAGCCATCGCACGAGTAAACCGTGTATT CCGCAATAAAAGCCGAGAAAATGGCGGCTTGATTGTGGATTATGTAGGCATTGCTGACGAGCTCGAAAAAGCCACTCGGC AATATACAAACTCACAAGGCAAGGGCAAACTGGCTGATAGCGTGATTGATGTATTCTTTAAAATGAAAGAGCATTTAGAA GTTATCCGCAGCCTGTTTGCAACGCCAGTTGAGGGGAAAACCTTTGATGTTCAGACGGTCTTAGAAAAAGATAATCCGAA TGATCTTTTGATGGCGATTCGTTTTGCCGCCAACCATATTTTAAGCCTTGATCAATTATCGTTTGATGGCAAAGCGCACG AGCAGCATTGGTTTAATAAAAAAGAAACCGAACCACGCAAAAAAGCCTTTTTGAAAGCGGCAGGCTTGGTAAAAAAAGGC TATATGCTGTGCGGCACATTGGCTGAAGTTGAGCCGTATAACCAAGAAATCGCCTTTTATGATGCCGTACGGGCAATTTT AACTAAACGTGAACAAAAAGGCACAGGCACAAATGAAAGACAGATTTTATTGAAAAAATTGGTTAATCAAACTGTGTATT CTGAAGGCGTGATTGATTTATTTGATCTGCTAGAAAAACCACAACCACAAATTAGCTTGCTTTCCGAGGAATTTTTACAA ACTGTAAAAAATAGCCCGACTAAAAATTTATGGGTTACGGCAATGGAACGTTATTTAGCAAGTGAAATTAAAGTTAAATC AGGCACAAACTTAACATTGCAAAAAGATTTTGAACGGCGTTTGAAGGAAGCATTGAATCAATACCACAATCACAATTTGA CTGTGGTAGAGATTTTGGACGAACTCTTTAAAATGAGCCAAGATTTCCAAGAACGTTTAGCATTAGGGAAAAAACTAGGA TTAACCAAGGAAGAACTAGCCTTCTATGAAGCTCTATCTCAAAATCAAAGTGCAAAAGATTTGATGGGTGATGAAGTGCT TTCTAAACTGGCGAAAGAAATCACGGAAACACTTAGAAAATCGGTCACAATCGACTGGCAGTACAAAGAAGCGGTGCGGG CAAAAATGCGTATTCTCGTTAAACGCGCACTACAACGCTACAAATATCCACCCGATAAACAGGAAGAAGCGATAACTTAT GTGATTAAACAAGCTGAAGAAATTGCTGAGGATTTAACTGGTTTATAA Protein sequence : MLNENDIEQLTLQRLQSLGWEYRYGKDLPVHEGKFARGDLSGVVFVEQLREAVRKLNPQLPESAVDSVVKSATKSDIGDL VVRNQTFYKLLRDGVRVEYTQNGEQKIEMVRLVDFEHWGNNRFVAVNQLEIRSRKGGKRIPDIIGFVNGLPLVVFELKNP LRESADLLQAFNQFETYKDEIAELFVYNQALIISDGIVARLGSLSADFQRFTPWKVVDEKNKSARLYFDDELQSLLNGLL QPKDLLDYIRYFVLFERDSVGKTIKKIAAYHQYYGVNEAVESTIFATSEQGDKRIGVMWHTQGSGKSISMLFYAGKLLAQ PELKNPTIVVVTDRNDLDGQLFQTFSSGKDLIKQTPQQVEDRDQLRQLLAQNEVGDVFFTTIQKFALNEEESRFPILNER NNIIVISDEAHRSQYGFTQKLHNGKFQTGYARHLRDALPNASFIGFTGTPISLEDKDTQDVFGRYVSIYDLQDAVEDGAT VPIVYEARQIKLAENANHDELFAEIDELLEGEENPKLRLREKLFGSEARLHDLAIDFVQHFAKRNEVVDSKAMMVVSSRQ ICVDLYNEIIKLRPEWHSDNINEGAIKIVMTGSASDASEMQKHVYSKQEKQTLERRFKDPNDPLKVVIVRDMWLTGFDAP CCNTMYLDKPMKGHNLMQAIARVNRVFRNKSRENGGLIVDYVGIADELEKATRQYTNSQGKGKLADSVIDVFFKMKEHLE VIRSLFATPVEGKTFDVQTVLEKDNPNDLLMAIRFAANHILSLDQLSFDGKAHEQHWFNKKETEPRKKAFLKAAGLVKKG YMLCGTLAEVEPYNQEIAFYDAVRAILTKREQKGTGTNERQILLKKLVNQTVYSEGVIDLFDLLEKPQPQISLLSEEFLQ TVKNSPTKNLWVTAMERYLASEIKVKSGTNLTLQKDFERRLKEALNQYHNHNLTVVEILDELFKMSQDFQERLALGKKLG LTKEELAFYEALSQNQSAKDLMGDEVLSKLAKEITETLRKSVTIDWQYKEAVRAKMRILVKRALQRYKYPPDKQEEAITY VIKQAEEIAEDLTGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
