Gene Information

Name : yfeD (R2846_0220)
Accession : YP_005828737.1
Strain : Haemophilus influenzae R2846
Genome accession: NC_017452
Putative virulence/resistance : Virulence
Product : Fe/Mn/Zn ABC transporter permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 216362 - 217177 bp
Length : 816 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTGATTGGCTTTTAGAACCGCTACAATTTGAGTTTATGCAAAATGCCTTATTGACCGCATTGATTGTTTCGATTAT
CTGTGCGTTACTTTCTTGCTATTTAGTCTTGAAAGGTTGGTCATTAATGGGCGATGCAATTTCTCACGCTGTATTACCTG
GTATTGTACTTGCTTATTTGGTAGGAATTCCTTTAGCCATTGGTGCATTTTTCTCAGGTATTTTTTGTTCGCTTGGTGTG
GGATATTTGAAAGAAAATAGCCGTATAAAAGAAGATACAGCAATGGGTATTGTATTTTCTGGAATGTTTGCCATTGGTCT
TGTTATGTTTACCAAAATTCAAACAGAACAGCATTTAACCCATATTTTGTTTGGTAATGTGTTGGGTGTAAGTCATCAAG
AGCTGATTCAAAGTGCGGTCATTTCTGCGATAATTTTTTGTTTGATTGTTTTCAAACGTAAAGACTTTCTGCTTTATTGT
TTTGATCCAAGTCACGCCCGTGTTGCAGGACTTTCTCCAAAAGTTTTACATTATGGCTTGCTAATATTACTTGCTTTAAC
CATTGTAAGCACGATGCAAGTGGTAGGTGTTATTTTGGTGGTGGCAATGTTAATTGCACCAGGAATTACCGCACTTACTC
TTACTAAATCTTTTGATAAAATGTTATGGGTTGCTATTGCAAGTTCCATTGCATCAAGCCTAATTGGCGTAATATTGAGC
TATCATTTTGATGCCTCAACAGGTGCTTGTATTATTCTTCTGCAAGCCGCATTTTTTGTTATAGCATTAGCTTATAGTAA
GATTAGAACAAGATAA

Protein sequence : 
MFDWLLEPLQFEFMQNALLTALIVSIICALLSCYLVLKGWSLMGDAISHAVLPGIVLAYLVGIPLAIGAFFSGIFCSLGV
GYLKENSRIKEDTAMGIVFSGMFAIGLVMFTKIQTEQHLTHILFGNVLGVSHQELIQSAVISAIIFCLIVFKRKDFLLYC
FDPSHARVAGLSPKVLHYGLLILLALTIVSTMQVVGVILVVAMLIAPGITALTLTKSFDKMLWVAIASSIASSLIGVILS
YHFDASTGACIILLQAAFFVIALAYSKIRTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-64 55
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-64 55
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-64 55
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-64 55
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-64 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_005828737.1 Fe/Mn/Zn ABC transporter permease protein BAC0442 Protein 3e-77 62
yfeD YP_005828737.1 Fe/Mn/Zn ABC transporter permease protein BAC0352 Protein 1e-64 55
yfeD YP_005828737.1 Fe/Mn/Zn ABC transporter permease protein BAC0441 Protein 3e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_005828737.1 Fe/Mn/Zn ABC transporter permease protein VFG0528 Protein 9e-65 55