Gene Information

Name : yfeC (R2846_0219)
Accession : YP_005828736.1
Strain : Haemophilus influenzae R2846
Genome accession: NC_017452
Putative virulence/resistance : Virulence
Product : Fe/Mn/Zn ABC transporter permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 215521 - 216369 bp
Length : 849 bp
Strand : +
Note : -

DNA sequence : 
ATGTTAGATTTATTGCTCGAACCTTTTTCCTATGATTATATGCTCAAGGCGATGATTTTGAGTACCGCAGTGGGTGCTAT
TTGTGCTTTTTTGTCTTCATATTTAATGCTTAAAGGCTGGTCTCTAATTGGCGATGCGCTTTCCCATTCTGTCGTGCCCG
GTGTCGCAATTGCCTATGCTTTTGCCTTGCCTTACGCACTTGGTGCATTTTTTGCCGGAATTTTAGCCGCACTTTCCATT
CTTTGGATTAAATCCATTTCAAAATTGAAAGAAGATGCTGTGATAGGTTTTATTTTCAGTACTTTTTTTGCATTAGGTCT
GTTAATTATTTCTTTAAATCCAACCGCAGTAAATGTGCAAAATATCATTTTAGGTAATATTTTAGGCATTGCCGATGAAG
ATATTTACCAAGTCGCAATTATTATCGGTGTTTGTTTAGTATTACTTTTATTATTTTGGAAAGATTTACTACTGATTTTT
TTCGATGAAACACAAGCAAGAACGGTAGGGCTTTCGCCATTATTTTATAAAGTTTTATTTTTCACATTATTAAGTGCTTG
TGTGGTGGCTGCATTGCAAACTGTAGGCGCGATTTTAGTGATTGCGATGGTCGTTACCCCAGGTGCGACAGCATATTTAC
TCACAGATAAATTCAAAACCTTGTCAATCATCGCTATTATTTTAGGGGCGGTGACAAGTTTTGTTGGTGTTTATATTAGC
TATTATTTAGATGGTGCCACAGGCGGTGTGATTGTGACATTGCAAACATTATTGTTTTTAGTAGCTTTCTTATTTTCACC
AAAATATGGCTTACTCACACGTAATAAAAAGGCGGTAGAAAATGTTTGA

Protein sequence : 
MLDLLLEPFSYDYMLKAMILSTAVGAICAFLSSYLMLKGWSLIGDALSHSVVPGVAIAYAFALPYALGAFFAGILAALSI
LWIKSISKLKEDAVIGFIFSTFFALGLLIISLNPTAVNVQNIILGNILGIADEDIYQVAIIIGVCLVLLLLFWKDLLLIF
FDETQARTVGLSPLFYKVLFFTLLSACVVAALQTVGAILVIAMVVTPGATAYLLTDKFKTLSIIAIILGAVTSFVGVYIS
YYLDGATGGVIVTLQTLLFLVAFLFSPKYGLLTRNKKAVENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-66 63
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-66 63
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-66 63
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-66 63
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-66 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_005828736.1 Fe/Mn/Zn ABC transporter permease protein BAC0441 Protein 1e-71 72
yfeC YP_005828736.1 Fe/Mn/Zn ABC transporter permease protein BAC0351 Protein 8e-67 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC YP_005828736.1 Fe/Mn/Zn ABC transporter permease protein VFG0527 Protein 8e-67 63