|
Name : topB (R2846_0136) Accession : YP_005828655.1 Strain : Haemophilus influenzae R2846 Genome accession: NC_017452 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 134781 - 136736 bp Length : 1956 bp Strand : - Note : - DNA sequence : ATGCGTTTATTTATCGCCGAAAAACCAAGCCTAGCTCGTGCTATTGCTGACGTACTCCCCAAGCCCCATCAACGTGGGGA TGGTTTTATTAAATGTGGCGATAATGATGTGGTAACTTGGTGTGTAGGGCATTTGCTCGAGCAAGCGGAACCCGATGTCT ATGATCCTAAATTCAAACAATGGCGTTTAGAACATCTCCCTATCATTCCTGAAAAATGGCAACTTTTACCGCGAAAAGAA GTTAAAAAACAACTTTCTGTGGTAGAAAAACTAATCCATCAAGCTGATACACTCGTTAATGCAGGAGACCCTGATAGAGA AGGACAATTACTTGTAGATGAAGTGTTCAGTTATGCCAATTTATCTGCCGAAAAACGCGATAAAATTTTACGCTGCTTGA TTAGCGACCTAAATCCAAGTGCGGTAGAAAAAGCGGTTAAAAAATTACAACCCAACCGTAATTTTATTCCTCTTGCCACA TCCGCTCTCGCACGAGCTCGCGCCGATTGGCTTTATGGCATTAATATGACCAGAGCCTATACCATTCGTGGCAGACAAAC TGGCTATGATGGAGTGCTTTCGGTTGGACGAGTGCAAACCCCTGTGCTAGGTTTAATTGTACGTCGAGATTTAGAAATTG AGCATTTCCAGCCCAAAGATTTCTTTGAAGTACAGGCTTGGGTTAATCCAGAGAGCAAAGAAGAAAAAACTCCAGAAAAA TCAACCGCACTTTTCAGTGCCTTATGGCAACCTAGCAAAGCTTGCGAGGATTACCAAGATGATGACGGCAGGGTGCTCTC TAAAGGATTAGCAGAAAACGTTGTAAAACGTATTACAAATCAACCTGCAGAAGTCACCGAATACAAAGACGTTCGTGAAA AAGAAACGGCGCCCTTGCCTTATTCACTTTCTGCGTTACAAATTGATGCAGCAAAGCGATTTGGTATGTCCGCTCAAGCC GTATTAGATACGTGCCAACGCCTATATGAAACTCATCGTTTGATTACTTATCCGCGTTCTGATTGTCGCTATTTGCCCGA AGAACATTTTGCCGAACGACACAATGTATTAAATGCAATTTCAACCCATTGTGAAGCTTATCAACGCTTACCAAATGTCA TTTCAACTGAACAGAGAAATCGCTGTTGGAATGATAAAAAAGTAGAAGCTCACCATGCAATCATTCCGACTGCCAAAAAT CGTCCAATACATCTAACACAAGAAGAACGAAATATTTACAGCCTTATCGCTCGCCAATATTTAATGCAATTTTGTCCTGA CGCAGAATATCGTAAAAGTAAAATCACATTAAATATCGCTGGCGGTACTTTTATAGCTCAAGCGCGAAATTTACAAACGG CTGGGTGGAAAGAATTATTAGGCAAAGAAGACGACACAGAAAATCAAGAACCCTTATTACCAATAGTAAAGAAAGGACAA ATTTTGCATTGTGAACGCGGAGAAGTGATGAGTAAAAAAACTCAGCCGCCAAAGCCTTTCACGGATGCAACCTTGCTTTC AGCAATGACGGGCATTGCACGATTTGTGCAGGATAAAGAACTCAAAAAAATCCTGCGAGAAACCGATGGATTGGGTACAG AGGCTACTCGCGCTGGCATCATTGAATTACTTTTTAAACGCGGTTTTTTAACAAAAAAAGGGCGAAATATTCACAGTACA GAAACTGGAAGAATTTTAATTCAAGCGTTACCAGATATTGCCACCCAACCAGATATGACAGCTCATTGGGAATCGCAACT CACAGACATTAGTCAAAAACAAGCAACCTATCAACAATTTATGCATAACTTGAATCAAATGTTGCCTGATTTAGTCCGTT TTGTAGATCTTAATGCATTAAGACAATTAAGCCGCATTAAAATGATTAAATCCGATAGGGCGAAACCTAAAAGTGCGGTA AAAAAATCGAGTAAATCAAACGGTCAAACTGATTAA Protein sequence : MRLFIAEKPSLARAIADVLPKPHQRGDGFIKCGDNDVVTWCVGHLLEQAEPDVYDPKFKQWRLEHLPIIPEKWQLLPRKE VKKQLSVVEKLIHQADTLVNAGDPDREGQLLVDEVFSYANLSAEKRDKILRCLISDLNPSAVEKAVKKLQPNRNFIPLAT SALARARADWLYGINMTRAYTIRGRQTGYDGVLSVGRVQTPVLGLIVRRDLEIEHFQPKDFFEVQAWVNPESKEEKTPEK STALFSALWQPSKACEDYQDDDGRVLSKGLAENVVKRITNQPAEVTEYKDVREKETAPLPYSLSALQIDAAKRFGMSAQA VLDTCQRLYETHRLITYPRSDCRYLPEEHFAERHNVLNAISTHCEAYQRLPNVISTEQRNRCWNDKKVEAHHAIIPTAKN RPIHLTQEERNIYSLIARQYLMQFCPDAEYRKSKITLNIAGGTFIAQARNLQTAGWKELLGKEDDTENQEPLLPIVKKGQ ILHCERGEVMSKKTQPPKPFTDATLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFLTKKGRNIHST ETGRILIQALPDIATQPDMTAHWESQLTDISQKQATYQQFMHNLNQMLPDLVRFVDLNALRQLSRIKMIKSDRAKPKSAV KKSSKSNGQTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-111 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-111 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-111 | 41 |
