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Name : topB (R2866_0603) Accession : YP_005827298.1 Strain : Haemophilus influenzae R2866 Genome accession: NC_017451 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : 5.99.1.2 Position : 596821 - 598866 bp Length : 2046 bp Strand : - Note : - DNA sequence : ATGAAATTATTTTTATGTGAAAAACCATCACAAGGCAATGATATTGCAAAAGTATTAGGTGCGACAAAGCGTGGTGAGGG TTGTTTATCAACACCTGACGGTCAGCTTACAGTTACCTGGGGAATTGGTCATCTAGTAGAGCAATTTAATCCTGAAGAAT ATGATCCTGCCTTTAAAAAGTGGGCATTTGAGACCTTGCCAATTATCCCGGGTAAATGGGGGCTTTCACCTAAAAAAGAA ACAAAAAAACAGTTCAATGTCGTCATGAAACTTATCAAACAAGCTAAACTTGTTGTCATTGCAACCGATATTGATAGAGA GGGCGAAACTATAGCAAGAGAATTGCTGGATTTGGCAGGATTTCGAGGGCAAATAAAACGCCTTTGGTTGTCTGCACTAG ATGATACCAGTATTCGCAAAGCCTTGGGCGCACTTAAAAATAATGAGGAGACACTACCTCTTTACTATGCGGGACTTGCA CGTAGTCGAGCTGATTGGCTTATTGGTATGAATTTCTCTCGTCTCTATACCTTATTAGCGCAACAACAAGGGTATCAAGG GAAACCTTTAAGTGTTGGTCGGGTACAAACTCCAACATTAAGCTTGGTTGTTAATCGTGACCGTGAGATAAAAAACTTCA TTCCTAAGCAACATTTTGCTTTGCAAGTAATGCTTTCTGATGGAAATCAGCATTTTGCTACGCAATATGTTATTCCGGAG CAATATTGTGATCCTGATGGACTTTGTTTGTCTGCCCAAGTTATACAAGCAGCAAATCAGCAAATTCGCCAATTTGGCCA AGCGAAAGTGGAATCAGTTGAAACTAAACGTGAAAGACAAAATGCCCCACTTTGCTTTGCATTAAGTGACTTACAATCAG AAGCTAACCGCCTTTATGGACTGGGTGCGCAAAGAGTATTGGATATAGCTCAATCACTTTATGAGACTCACAAAGCGACA ACCTATCCTAGAACAGATTGTGGTTATTTACCGGAGTCTCAGTTTGCAGAAGCGCCTCAAATTATCCAATGTTTGTTGCA ATCCGATAATCGATTACACCCCCTTGCAGGTATGTTAAACCTTAATCAAAAATCACGAGTTTGGAATGATAAAAAAATTA CTGCTCACCATGGCATTATTCCGACTATGATTAAAGCTGATATTAGCAAAATGTCTGATGAAGAATTAAAGCTCTATGAT CTCATACGTCGTCGTTATTTAGCTCAATTCTTACCTGTTTCTGAAACAGATAAGACACAAATTATTTTGAAGTGCGGTCA ACATATATTAAGTGCACGTGGGAATGTGCTTATTGCTCCAGGTTGGAAAATTCTATTTGGCAAATCACTTGATGAAGATG ATGACGCACCTCAAGCCTTGCCGACGTTAAAGCAAGGACAAATCTGTCAGATTTCTGATTCAGAAATAAAAACCTTACAA ACATCACCACCTAATCACTTCACGGAAGGTACATTGCTCACCGCAATGAAAAATGCAGCTCGCTTTGTAACTGATGAGCG TTTAAAACAACGCTTACGAGAAACTGAAGGGCTTGGAACAGAAGCTACTCGGGCGGGAACGATTCAAGGTTTGATTGATA AAGGTTTCTTGAAAAAGAAAGGTAAATCACTATTAGCGACAGATGAAGCAATGACGCTAATTGATAATTTACCTCAGATG TTAAAAGATCCGGGTTTAACCGCACTTTGGGAGCAAGCGCTCAATCAAATTGCTGAAAGAACGCTTTCGCTAGAAGTGTT TATGCAAAAACAAGAAGTCTTTGTGCGGCATTTGATGGCTGATTGCCTTAAAAAGGGAATGAGTTTGGGGAATATTGAAA TTCGTAAATGCCCTAAGTGCGGTGCACCAATGATTAAAAGAAATGGTAAAAATGGGGCTTTTTTTGGGTGTTCTGCTTAT CCAAATTGCCAACATATTGAAAATATTGATAGCAAGAAGAATACTAAAAGTACAAAAAATTTAAAGAAAAAGTCGAGTAA AAGTGTGAGTGAGCAAATTTCATCTTTACGAAGCTTATTGAACTAG Protein sequence : MKLFLCEKPSQGNDIAKVLGATKRGEGCLSTPDGQLTVTWGIGHLVEQFNPEEYDPAFKKWAFETLPIIPGKWGLSPKKE TKKQFNVVMKLIKQAKLVVIATDIDREGETIARELLDLAGFRGQIKRLWLSALDDTSIRKALGALKNNEETLPLYYAGLA RSRADWLIGMNFSRLYTLLAQQQGYQGKPLSVGRVQTPTLSLVVNRDREIKNFIPKQHFALQVMLSDGNQHFATQYVIPE QYCDPDGLCLSAQVIQAANQQIRQFGQAKVESVETKRERQNAPLCFALSDLQSEANRLYGLGAQRVLDIAQSLYETHKAT TYPRTDCGYLPESQFAEAPQIIQCLLQSDNRLHPLAGMLNLNQKSRVWNDKKITAHHGIIPTMIKADISKMSDEELKLYD LIRRRYLAQFLPVSETDKTQIILKCGQHILSARGNVLIAPGWKILFGKSLDEDDDAPQALPTLKQGQICQISDSEIKTLQ TSPPNHFTEGTLLTAMKNAARFVTDERLKQRLRETEGLGTEATRAGTIQGLIDKGFLKKKGKSLLATDEAMTLIDNLPQM LKDPGLTALWEQALNQIAERTLSLEVFMQKQEVFVRHLMADCLKKGMSLGNIEIRKCPKCGAPMIKRNGKNGAFFGCSAY PNCQHIENIDSKKNTKSTKNLKKKSSKSVSEQISSLRSLLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 0.0 | 68 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 3e-158 | 52 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 2e-162 | 52 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-153 | 51 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-153 | 51 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 9e-154 | 51 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 3e-152 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 1e-143 | 47 |
