Gene Information

Name : hsdM2 (R2866_0496)
Accession : YP_005827193.1
Strain : Haemophilus influenzae R2866
Genome accession: NC_017451
Putative virulence/resistance : Virulence
Product : Probable type I restriction modification system, methylase component HsdM2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 500180 - 502552 bp
Length : 2373 bp
Strand : -
Note : -

DNA sequence :
ATGGAGCATTCTGTTCATAACAAACTGGTTTCTTTTATTTGGAGTATTGCAGACGATTGTTTGCGCGATGTGTATGTGCG
CGGTAAATATCGTGATGTGATTTTACCGATGTTTGTGCTTCGTCGTTTGGATACTTTACTTGAGCCAAGCAAAGATGCCG
TATTGGAAGAAATGCGTTTTCAAAAAGAAGAATTGGCATTCACCGAATTGGATGACCTTCCCCTTAAAAAAATTACCGGT
CATGTTTTTTATAACACCTCAAAATGGACATTAAAATCCCTCTATCAAACCGCCAGCAATACGCCGCAGTATATGCTGGC
CAATTTTGAAGAATATCTTGATGGTTTCAGCACCAACGTTCATGAAATCATCAACTGCTTCAAGCTGCGTGAACAAATCC
GCCACATGTCCCATAAAAATGTTTTGCTGAGTGTGTTGGAAAAATTTGTATCGCCCTATATCAATCTTACCCCTAAAGAA
CAACAAGACCCTGAGGGCAACAAATTACCAGCGCTGACCAATCTGGGCATGGGCTATGTATTTGAAGAACTGATTCGTAA
ATTTAACGAAGAAAATAACGAAGAAGCTGGCGAACACTTTACCCCACGCGAAGTGATCGAGCTGATGACGCATTTAGTCT
TTGATCCGCTCAAAGACCAAATTCCGGCCATTATTACGATTTACGACCCAGCTTGCGGCAGCGGTGGCATGCTGACCGAG
TCGCAAAACTTTATTGAGCAAAAATATCCGCTATCTGAATCACAAGGCGAGCGTTCCATCTTTTTGTTTGGTAAAGAAAC
CAATGATGAAACCTATGCCATTTGTAAATCTGACATGATGATTAAAGGCGACAACCCTGAAAACATCAAAGTCGGCTCAA
CCCTTGCTACAGATAGCTTCCAAGGTAATCACTTTGACTTTATGCTTTCCAACCCGCCATATGGCAAAAGCTGGAGCAAA
GATCAAGCCTATATCAAAGACGGCAATGAGGTTATCGACAGTCGCTTTAAAGTTACCTTACCAGATTACTGGGGCAATGT
AGAAACCCTTGATGCCACCCCGCGCTCCAGCGATGGTCAGCTGCTTTTCCTGATGGAAATGGTCAACAAAATGAAATCGC
CGAAAAACAACAAAATCGGCAGCCGTGTTGCCTCTGTGCATAACGGCTCAAGCCTGTTTACCGGCGATGCAGGTTCAGGA
GAAAGCAACATCCGTCGCCATATCATTGAGAATGATTTGCTGGAAGCCATCGTAAAGCTACCTAACAACCTGTTCTACAA
CACAGGCATTACCACCTATATTTGGTTGCTGTCCAACAATAAATCCGAAGCACGCAAAGGCAAAGTACAGCTGATTGATG
CCAGCCTCTTATTCCGCAAATTGCGTAAAAACCTTGGCGATAAAAACTGCGAATTTGCACCTGAACATATCGCCGAAATT
ACCCAAAACTATCTTGATTTCACCGCCAAAGCACGGGAAATCGACAGTCAAAATGAAGCGGTCGGTTTGGCTTCGCAGAT
GTTTGACAATCAAGATTTCGGCTATTACAAAGTCACCATCGAACGCCCGGATCGCCGTTCTGCCCAATTTACCGCAGAAA
ATATCGAGCCTTTACGGTTTGACAAAGCCTTGTTTGAGCCCATGCAATATCTTTATCGGCAATATGGCGGACAAGTTTAC
AACGCCGGATTTTTAGCCCAAACCGAGCAAGAAATTACCGCTTGGTGCGAAGCGCAGGGCATAGCCTTAAACAACAAAAA
CAAGGCAAAGCTGCTGGATGTCAAAACCTGGGAAAAAGCCGCCGCACTTTTTCAGACGGCATCAAAACTGCTCAAACATT
TCGGCGAACAACAATTTCACGATTTCAACCAATTCAAACAAGCCGTGGAATGCCGTCTGAAAGCCGAAAAAATCCCCCTT
TCTGCCACAGAGAAAAAGGCCGTTTTCAATGCCGTAAGCTGGTACAACGAAAATGCCGCCAAAGTGATTGCCAAAACGCT
CAAGCTCAAACCAAACGAATTGGATGCTCTTTGCCAACGCTACCAATGCCAAGCCGACGAGCTGGCAGACTTTGGCTATT
ACGCCACCGGCAAAGCAGGCGAATATATCCTATATGAAACGAGCAGCGACTTGCGCGACAGCGAATCCATACCGCTCAAA
CAAAATATCCACGACTATTTCAAAGCCGAAGTGCAAGCGCACATCAGCGAAGCATGGCTGAATATGGAAAGCGTAAAAAT
CGGCTATGAAATCAGCTTCAACAAATACTTCTACCGCCACAAACCATTACGCAGCCTTGCAGAAGTTGCCCAAGATATTT
TGGCGTTAGAAAAACAGGCTGACGGCTTGATTAGTGAAATTCTAGAGGCTTAA

Protein sequence :
MEHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRFQKEELAFTELDDLPLKKITG
HVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNVHEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKE
QQDPEGNKLPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE
SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSFQGNHFDFMLSNPPYGKSWSK
DQAYIKDGNEVIDSRFKVTLPDYWGNVETLDATPRSSDGQLLFLMEMVNKMKSPKNNKIGSRVASVHNGSSLFTGDAGSG
ESNIRRHIIENDLLEAIVKLPNNLFYNTGITTYIWLLSNNKSEARKGKVQLIDASLLFRKLRKNLGDKNCEFAPEHIAEI
TQNYLDFTAKAREIDSQNEAVGLASQMFDNQDFGYYKVTIERPDRRSAQFTAENIEPLRFDKALFEPMQYLYRQYGGQVY
NAGFLAQTEQEITAWCEAQGIALNNKNKAKLLDVKTWEKAAALFQTASKLLKHFGEQQFHDFNQFKQAVECRLKAEKIPL
SATEKKAVFNAVSWYNENAAKVIAKTLKLKPNELDALCQRYQCQADELADFGYYATGKAGEYILYETSSDLRDSESIPLK
QNIHDYFKAEVQAHISEAWLNMESVKIGYEISFNKYFYRHKPLRSLAEVAQDILALEKQADGLISEILEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hsdM2 YP_005827193.1 Probable type I restriction modification system, methylase component HsdM2 VFG1102 Protein 0.0 71