Gene Information

Name : FSU_3219 (FSU_3219)
Accession : YP_005822963.1
Strain : Fibrobacter succinogenes S85
Genome accession: NC_017448
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3731892 - 3732512 bp
Length : 621 bp
Strand : +
Note : identified by match to protein family HMM PF02397

DNA sequence :
ATGTACGCCCGTTTCTTCAAGCGCCCTCTCGACTTTTGCTGCGCTCTGGCAGCCATCATCTGCCTGAGCCCGATTCTCGT
CGTACTCACGATTCTCGGCGCAATCAAGATGAAGGGCAACCCGTTCTTTACGCAGCCGCGCCCGGGCCTCAACGAAAAAA
TCTTCAAGCTCATCAAGTTCCGCACAATGACGAACGAGAAGGATGCCAACGGCAACCTGCTCCCTGACGACGTGCGGCTG
AACGCCTACGGCAAGTTCCTACGCAGCACAAGTCTCGACGAACTTCCGGAACTGTTCAACATCCTCAAGGGCGACATGGC
CGTAATCGGGCCTAGACCATTATTAGTGAAGTATTTACCATATTACACCGAACACGAAAGAATACGCCATAGTATAAGAC
CTGGGTTAACAGGATATGCTCAAGCTCATGGTCGAAATGAAATTACGTGGGAAAGAAAGTTTGAATTAGATGTTTGGTAT
GTTGATCATCTTACGTTTCTCACGGATGTAGGAATAATTATTGATACAGTAAAAGTTGTTCTATCGCATGACGGAGTATC
GCTAAACGCATTGGAGGACTTTGATGAGTACAGAAAGCGTACTTCAGACTCCAATAGTTAA

Protein sequence :
MYARFFKRPLDFCCALAAIICLSPILVVLTILGAIKMKGNPFFTQPRPGLNEKIFKLIKFRTMTNEKDANGNLLPDDVRL
NAYGKFLRSTSLDELPELFNILKGDMAVIGPRPLLVKYLPYYTEHERIRHSIRPGLTGYAQAHGRNEITWERKFELDVWY
VDHLTFLTDVGIIIDTVKVVLSHDGVSLNALEDFDEYRKRTSDSNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 4e-27 46
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-27 41