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Name : clpC (FSU_3208) Accession : YP_005822954.1 Strain : Fibrobacter succinogenes S85 Genome accession: NC_017448 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : - COG ID : - EC number : - Position : 3720335 - 3722851 bp Length : 2517 bp Strand : + Note : identified by similarity to SP:P37571; match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGGCAGATATCAACGGTATTTTTTCAGCTAAGGCAAAAGCAGCGCTGCAGGCGGCACGTATTGCGGCCCGCAATTTAGG GAGCGACTGCGTAACGGTAGAACACCTTTTGTTTGGTCTTGTTCGCGAGGATTCTGGTGTTGCCTCGGAAACGCTCAAGG CTTTGAAGGTCAACCTGACGGAACTCAGTGAGACCATCCAGCGTGCGCTGAGTACGAACGGCGGCCTCATGACGGTCGGT GGCGATTCTCACGGCGGTCTTTTGACATTTACGGGACAGTGCAAGGCGGTGCTTTACAATGCCGCGAAGATTGCCAAGGA AGAAGGCGTCCAGTTCATTGGCCCCGAACACTTGATGCTTGCGATTTTGCAGCAGACCGATTCTCCGGCGGCAGCAACGC TCTCGACGTACAACGTGACGTTTGAAAACTATCAGGAAATGCTGATGCAAATCAAGCGCCAGGCTGACGGACAGCCGATG GATGAAGGTCAGCCCGAAGATGAACCGCGTGAACGTTATACGCAAACTCGTCAGGCGAATCCGCAGTCCCGTTCCAAGAC GCCGATTCTTGAACATTTCGGTCGTGACCTCACGGCGATGGCTCGCGCAGGCAAGCTCGATCCGATTATCGGCCGTGAAG CAGAAATTGAACGCTTGATCCAGATCCTTTGCCGTCGCAAAAAGAACAATCCGGCGCTCATTGGCGAACCGGGCGTGGGC AAGACTGCGATTATCGAAGGCCTTGCTCTCAAGATTGTGCAGCGCAAGATTCCGGACCTCTTGGCGAACAAGCGCGTGGT GACGCTTGACGTTGCCGCCATGGTGGCCGGTACAAAGTATCGTGGCCAGTTCGAAGAACGCGTGAAGGGCCTCATCATGG AACTCCAGCGCGTGGGCAATTCCGTGATTCTCTTTATCGATGAACTCCACACGATTGTGGGCGCAGGCGGCTCCGAAGGC AGCCTTGATGCATCAAACATCTTTAAGCCCGCTCTTGCACGTGGCGAACTCCAGTGCATTGGCGCTACGACTTTTGATGA ATACCGCAAGTACATCGAGAAGGATCCGGCTCTTGAACGTCGCTTCCAGACGATTATTGTGAATCCGCCGACGGTCGAAG ATTCTATCCAGATTCTCGAAGGTCTCCGCCCGAAGTATGAACAACATCACAATGTTCATTACACGCCGGATGCCGTGCGT GCCGCTGTTGAACTTGGTGAACGCTACATCAGCGAACGCTTCTTGCCAGATAAGGCGATTGACGTGCTTGATGAAGCAGG TGCTCGCGTGCGCCTGAATTCCATCAAGATTCCGCAGGACTTGCAGAACATGGAAGACGAGCTTGGTGTCTGCCTCCAGA AAAAGGAAGAAGCGGTAGCCAACCAGGATTACACTTCGGCGGCCCAGCTCCGCGCCCGCGAAGAAGAATTGCAGAACAGC ATTGCCGAACGCAAAAAGCAGCTGCAGAGCGAAGAATCCGAAACGCCGGTTGTCGATGACAACGTTATCCGTGACGTCAT CAGTAAGATGACGGGAATCCCGGTCCGCAGACTCGGTGGCGAAGAAGCGCAAAAGCTCATCCACCTCGGCGATGAAATCA AGCAGCGCGTGATTGGCCAGGATCAGGCCGTTGATGCGATTGTGAAGTCTATCCGCCGTAGTCGTGCAGGCATTCGCAAC AACAAGCGCCCTATGGGAAGCTTCCTCTTCTTGGGACCGACGGGTGTCGGCAAGACGGAACTCGCGAAGGTGCTTTGCAA GGAACTTTTCGGCAGCGAAGATTCGCTTGTGCGTATTGACATGAGCGAATACATGGAAAAGCATAGTGTGAGCCGCTTGA TTGGCGCTCCTCCGGGATACGTGGGCTTTGAAGATGGCGGTGGCCAGCTGAGCGAAAAGGTGCGCAAGCATCCGTATTCT GTGGTGCTGCTTGACGAAATTGAAAAGGCTCATCCGGACATATACAACTTGCTCCTCCAGATTTTGGACGATGGCATTTT GACGGATAGCTATGGCCGCAAGATCAACTTCAAGAATACGATTATCATCATGACGAGTAACGCTGGAGCCCGTGAAGTCC GCCATAGCAGTGGCATGGGCTTTACCAAGATGGGCGAGACGGACGATTACGAACGCATGGAAACCGCCATTCGTGAAGAA GTTAAGCGCGTGTTCTCGCCGGAATTTTTGAACCGCGTGGACGAACAGATTGTGTTCCGCGCCCTCTCGAAGAAGGACCT CGTTTCTGTCGTGGACATCCAGATGGGATTCTTGCAGAAGAACCTTTCCGACCGCGGTATCCTCTTGGAAATGAGCCAGG AAGCAAAGGAATTTGTCGTAAACCACAATTACGATGCTTCGCTGGGGGCACGCCCGATTCGCCGCTCCATCCAGAATCTG GTGGAAGACGAAATCGCCGAAGGGCTTTTGCTCGGGACGATGACGGACTTCTCCACGATTTACGTGGGCGTTGAAAACGG CAAACTCTCGTTCAAGTGCGAGAAGATAAAATCGTAG Protein sequence : MADINGIFSAKAKAALQAARIAARNLGSDCVTVEHLLFGLVREDSGVASETLKALKVNLTELSETIQRALSTNGGLMTVG GDSHGGLLTFTGQCKAVLYNAAKIAKEEGVQFIGPEHLMLAILQQTDSPAAATLSTYNVTFENYQEMLMQIKRQADGQPM DEGQPEDEPRERYTQTRQANPQSRSKTPILEHFGRDLTAMARAGKLDPIIGREAEIERLIQILCRRKKNNPALIGEPGVG KTAIIEGLALKIVQRKIPDLLANKRVVTLDVAAMVAGTKYRGQFEERVKGLIMELQRVGNSVILFIDELHTIVGAGGSEG SLDASNIFKPALARGELQCIGATTFDEYRKYIEKDPALERRFQTIIVNPPTVEDSIQILEGLRPKYEQHHNVHYTPDAVR AAVELGERYISERFLPDKAIDVLDEAGARVRLNSIKIPQDLQNMEDELGVCLQKKEEAVANQDYTSAAQLRAREEELQNS IAERKKQLQSEESETPVVDDNVIRDVISKMTGIPVRRLGGEEAQKLIHLGDEIKQRVIGQDQAVDAIVKSIRRSRAGIRN NKRPMGSFLFLGPTGVGKTELAKVLCKELFGSEDSLVRIDMSEYMEKHSVSRLIGAPPGYVGFEDGGGQLSEKVRKHPYS VVLLDEIEKAHPDIYNLLLQILDDGILTDSYGRKINFKNTIIIMTSNAGAREVRHSSGMGFTKMGETDDYERMETAIREE VKRVFSPEFLNRVDEQIVFRALSKKDLVSVVDIQMGFLQKNLSDRGILLEMSQEAKEFVVNHNYDASLGARPIRRSIQNL VEDEIAEGLLLGTMTDFSTIYVGVENGKLSFKCEKIKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005822954.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 2e-157 | 51 |
| clpC | YP_005822954.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 49 |
