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Name : FSU_2228 (FSU_2228) Accession : YP_005822116.1 Strain : Fibrobacter succinogenes S85 Genome accession: NC_017448 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2565301 - 2567064 bp Length : 1764 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGAGTGTTTTCAAAAGACTAACACCTTATATGCAATCGCGAAAAATTTTATATCCGTTTGCACTTTTATTTTCATCATT GAGTTCCATCGCAGGGATCGCTCCCTTTATATATGTATGGCTCATCGTCCGTGAATTATTCGCTGACACAGGTAATATTT CATACGACATGGTCAAGCATTACGCATTGATGGCCGTCATTTTCTCCGTCATAAGCATCGTGCTCTATTTTTCAGCGCTC ATCTGTTCGCACTTAGTCGCCTTCCGCATCGAAGGCAACATCCGCAGAATCACCATGAAAAAATTGCTCAAGCTCCCGCT TGGCTTTTTCGACAAGAATCCCACCGGACGCATCCGCAAAATCATTGACGACAACGCAGCCGTCACACATACATTCATGG CGCACGAACTCCCGGATTTAGCAGGGACCATCGTCGTTCCCATCGCCTCGCTCGTATTGTTGTTCATTTTCGATTGGCGT CTTGGCATCGCCTCCCTCGTCCCAATTGCCTACGCCATCATCACGCTCGGCTCCAAGATGAACAAGAGCAAGGACTTTAT GCAAAAATACATGAAGTCGCTCGAAGATATGAACACCGAAGCCGTCGAATATGTGCGCGGCATTCCCGTTGTTAAAGTTT TCCAACAAACTATTTTCTCGTTCAAGAATTTTTATAAGACAATTGATGATTACCATCAGATGGTCACTGCATATTCCAGC AGCTGGAAGTTCATCATGTGTTCTTACACGACGCTCATCAACGGAGTCGCCCTCATCCTCGTCCCCACAACATTCCTCAT CGCAACGAGTTCCGGCAACATCGCCGCAACAATCGTCGATTTGATGCTCTATGTTCTCGTAACCCCAGTATTTTCGCAGT GCGTCATGCGCAGCATGTACTTGAGCCAGGCCGTAAACCAGGCAAAACTTGCCATCGGCAGCATCGAATCGTTGACAGAT TACCCGGAACTTGCTACACCGACAAACCCGCAAGAAGTCAAGCATTTCGATATTGAATTCAAGAATGTCAAGTTCACCTA CCCCGGCACAGAAAATGAAGTCCTTCATGACATTTCATTCAAAATAAAGGAAGGCGAAACAGTCGCACTCGTTGGTACAT CTGGCGGCGGCAAGAGCACCATCGCAAAGCTCGTCCCGAGATTCTTCGACGCCAACGATGGTGAAATTTTAGTCGGCGGC GCGCCCATCAAGGAAATACCCCAAGAAGTCCTCATGAAAAACACATCATTCGTTTTCCAGAATACTCGACTCTTCAAGAA GAGTATTTTGGAAAACGTCCGTTACGGAACTCCTGAGGCATCCATTGAAAGCGTCAACAAGGCGCTTGATCTCGCCCAAT GCCGCGAAATCATTGACCGCCTGCCCGAAGGCATCAACACCGTCATCGGTAGCAAGGGTACATACCTCTCCGGTGGCGAA CAGCAGCGAATCGTCCTTGCCCGCGCCATTCTCAAGAACGCGCCGATCGTCGTTCTTGACGAAGCGACCGCATTTGCAGA CCCCGAAAACGAAAGCCTTATCCAGCAAGCACTGCAAACGCTTTCGAAGGGCAAAACAGTCTTGATGATTGCACACAGAC TCACAAGCATCGTTAACGCCGACCAGATTCTCGTCGTACAAGGCGGCCGCATCATGGAACGCGGCACGCACAAGGAACTC GTTGAAAAGGGCGGCGTATTCGCCAAGATGTGGCAAGATTATCAGCAGTCCGTCAGCTGGACTATCGGAGGCAAGAATGT ATAA Protein sequence : MSVFKRLTPYMQSRKILYPFALLFSSLSSIAGIAPFIYVWLIVRELFADTGNISYDMVKHYALMAVIFSVISIVLYFSAL ICSHLVAFRIEGNIRRITMKKLLKLPLGFFDKNPTGRIRKIIDDNAAVTHTFMAHELPDLAGTIVVPIASLVLLFIFDWR LGIASLVPIAYAIITLGSKMNKSKDFMQKYMKSLEDMNTEAVEYVRGIPVVKVFQQTIFSFKNFYKTIDDYHQMVTAYSS SWKFIMCSYTTLINGVALILVPTTFLIATSSGNIAATIVDLMLYVLVTPVFSQCVMRSMYLSQAVNQAKLAIGSIESLTD YPELATPTNPQEVKHFDIEFKNVKFTYPGTENEVLHDISFKIKEGETVALVGTSGGGKSTIAKLVPRFFDANDGEILVGG APIKEIPQEVLMKNTSFVFQNTRLFKKSILENVRYGTPEASIESVNKALDLAQCREIIDRLPEGINTVIGSKGTYLSGGE QQRIVLARAILKNAPIVVLDEATAFADPENESLIQQALQTLSKGKTVLMIAHRLTSIVNADQILVVQGGRIMERGTHKEL VEKGGVFAKMWQDYQQSVSWTIGGKNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-108 | 42 |
| EF0583 | NP_814348.1 | ABC transporter ATP-binding protein/permease | Not tested | Not named | Protein | 1e-88 | 41 |
| ef0101 | AAM75304.1 | EF0101 | Not tested | Not named | Protein | 7e-89 | 41 |
