Gene Information

Name : ssb (FSU_0227)
Accession : YP_005820381.1
Strain : Fibrobacter succinogenes S85
Genome accession: NC_017448
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 258003 - 258482 bp
Length : 480 bp
Strand : +
Note : identified by similarity to SP:P02339; match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence :
ATGGCTTATTTGAATAAGGTTATGCTCATCGGTAATATCGGTAAGGATCCGGAAGTTCGCGTGAATCCCAATGGCGGTCG
CAAGCGTGTTTCTTTCTCCCTCGCCACTTCTCGTCGCTATCGTGACAACAACGGTGAACAGAAGGAACAGACCGACTGGC
ACAACATCATTGGCTGGGGCAAGATTGCAGATATCGTTGAACAGCTCGGCATTCGCAAGGGCATGAGCCTTTATGTTGAA
GGTTCCCTCACCAACCGCAGCTGGACAGACCAGACCAGCGGCCAGAAGCGCTATGTCACTGAAATCAACATGGACACGTT
CCAGCTCCTCACTCCGCGTGGCCAGGGTGGTGCTCCGGGTGCAGGTGGTTTCAGCCAGGCCAACAGCTACCAGCCCAACA
GCTTTAACGGCATGCAGCAGAATAGCGCTCCGGCCTACGATGCAGGCATGGCAGAAGACGACGTAGATCTTCCGTTCTAA

Protein sequence :
MAYLNKVMLIGNIGKDPEVRVNPNGGRKRVSFSLATSRRYRDNNGEQKEQTDWHNIIGWGKIADIVEQLGIRKGMSLYVE
GSLTNRSWTDQTSGQKRYVTEINMDTFQLLTPRGQGGAPGAGGFSQANSYQPNSFNGMQQNSAPAYDAGMAEDDVDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 4e-16 41
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 4e-16 41
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 3e-16 41